Lacibacter sediminis: H4075_06810
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Entry
H4075_06810 CDS
T06746
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lacs03000
]
H4075_06810
Transcription factors [BR:
lacs03000
]
Prokaryotic type
Helix-turn-helix
Other families
H4075_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF_2
GAF
Sigma54_activ_2
GAF_3
AAA_5
AAA
AAA_2
HTH_8
Mg_chelatase
AAA_3
AAA_16
AAA_7
bpMoxR
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QNA45896
UniProt:
A0A7G5XK93
LinkDB
All DBs
Position
complement(1565158..1568427)
Genome browser
AA seq
1089 aa
AA seq
DB search
MPNRSVNKKPSPKSASVTDPSNKKKDRINLENAITEKDILLSLNNDIASVKDKKDILKII
HPKLKMLFNTDDIFICCLDAKNETLNPIVRVGGKKRNSHPDYENILSSHFPIHDGFIDTI
LNSKEPLVFDIDKVNKLPNPPGYMKISKATGLAETLSTPLYHGGDLLGILTFWSEKKNSF
TDHHKQLISQIADHISILIINILAYEAIKKNETENEILLLLSNKIASIRNKEDLSHVLST
TLKANINFDDCAVTVYNKARNAYNIYSYHVAKKRQENPLFKQIILTEYPLSDNNLSNPHT
PVVIDMDKLIKSGNSAVSFMRDTGIKELAIIKLVDGNDLIGLFVLLSEQIKSFTQSDLHI
MQRVSYQISIAVAKLLSNEEIERRESEKSLLLSISNDMALVRGHEDLAKIINQKLKKLFS
IQDYTIVALHENKLTYGSYLYDQEDTPYDKKREYLETLFNSFKFEEGLYDVVLKSDEPVV
FDVDEIMKRKVVPGHIKFFNSLGIREIVGTTLRIGNDAIGILWIQPEKANCFDTVNQNVF
KAVCSQISIALANIIANEDIQRRQEEKEILLLLSNDIASIRSRADLLGIITKQLKKLFNY
NDASIIILNKKDKTYSAFVLDMEERRTSHEECLPNSIGTYPIADGICDAILDAGQPIILK
YREVLKHPAAPSWAFFLHKTGINEMVCVTLKDGKDDIGAFFLHSETENYFQEYQLNLIQG
IGYQLSAALSNVLANEKIAAQLEEINHYKSQLEEENIYLQQQIESAYNYSEIIGSGPAIQ
KVFHLISQVSFANSTVLILGETGTGKELIARAIHNASPRKDRLMVKVNCAALPPNLIESE
LFGHERGSFTGATDRRIGKFELANHSTLFLDEIGELSPEIQVKLLRALQEKEIERIGGKT
TIKIDVRIITATNRNLQKEVDEGNFRTDLFYRLNVFPITLPALRNRKEDIPALAEYFVAK
YSRIAGKKIRSLSKKVMKELMGYSWPGNVRELEHLIERTVLVTEVDVIKEIHLPVLEQSK
IKNKEDNLYTKTIQENEREYILEVLKQCEGRIFGKNGAAEVLGVPVSTLNSKIKKLGIKK
EKMFTNSAK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcgttctgttaataagaaaccttcacctaaatcggcaagtgtaactgatcct
tcaaacaaaaaaaaggatcggataaatttggaaaatgcaattacagaaaaggatattcta
ctttctttaaacaacgacatagcatctgtaaaggataaaaaagatatacttaaaatcatt
catcctaaattgaaaatgctatttaatacagatgatatttttatctgttgccttgatgcg
aagaatgaaacattaaacccaatagtgagagttggaggcaaaaaacgtaacagtcacccc
gattatgaaaacatattaagttcacactttccgattcacgatggctttattgatacgata
ttaaactcaaaagaaccacttgtatttgatattgataaggtgaataaattaccgaatcct
cccggctatatgaagatttcaaaagcaacgggtttggctgaaacgctttccactccatta
tatcatgggggtgatcttttagggatactcactttttggtcagaaaaaaagaattcattc
acagatcaccacaaacaattaatatcacaaatagctgaccacatctccattctaataata
aatattttggcttacgaagccatcaaaaaaaatgaaacagaaaatgaaatattgctattg
ctcagcaataaaattgcttccatccgtaacaaagaagatctcagccatgttctttccacc
acattaaaagctaatattaattttgacgactgtgctgttactgtctataataaggcaagg
aacgcttacaatatttattcttaccatgtagccaaaaagcgccaggaaaatccattattc
aaacagataatacttactgaatacccgcttagtgacaataatctttcaaatccacatacg
ccggttgtaattgatatggacaaactgattaagagcggaaacagcgcagtttcgtttatg
agggatacaggtataaaggaattggcaataataaaacttgtagatggaaacgatttaatt
ggtctttttgttttactgagtgaacaaataaaatcatttacacaaagcgacctgcacatc
atgcaaagagtatcttatcagatatctattgcagttgccaaattgctttcaaatgaagaa
atagaacggagagaatctgaaaagtcattattgttgtcaataagtaatgacatggccctt
gtacgtggccatgaagacctggcgaaaattattaaccaaaagcttaagaaactattttca
atacaagattatacaatagtagccctgcatgaaaataaacttacgtatggttcatatcta
tacgaccaggaagacaccccttatgataaaaaacgagaataccttgaaactttattcaac
agtttcaaatttgaagaagggctctatgatgtggtattaaaatcagatgagccggtagtt
ttcgatgttgacgagatcatgaaacgtaaagtcgtgcctggccacatcaagttttttaat
tcactgggtatccgggagatagttggaacaacgttaagaattggaaatgacgctatcgga
attctctggattcagcctgaaaaagcaaattgttttgatacggtcaatcagaatgttttt
aaagcagtgtgctcgcaaatatccatcgccctggccaatatcattgccaatgaagatatt
cagcggcggcaggaagaaaaagaaattttactactattaagtaatgacatcgcttccatt
agaagccgagcagacctgcttggcatcataacaaagcagttgaaaaaactctttaattac
aacgatgcttccattatcattttaaataaaaaagataaaacttacagtgcttttgtgctg
gatatggaagagcgaagaacgagccatgaagaatgtcttcccaattcaatcggaacatat
cccattgcagatggcatatgcgatgctatcctggatgcagggcaaccgattattttgaaa
taccgggaagtgcttaaacatccggctgcaccaagctgggctttcttcctgcacaaaaca
ggcattaatgaaatggtatgcgttacattaaaagatggtaaagatgacattggtgctttt
ttcttacactccgaaacagaaaactatttccaggaatatcaattgaaccttatccaggga
atcggttatcaattatcagctgcattgtctaatgttttagccaatgaaaagatcgcagcg
caattggaagagatcaatcattacaaaagccagttggaagaagaaaatatctacttacaa
caacaaattgaatcagcctataactatagtgaaataataggctctggacccgcaatacag
aaagtatttcatcttatatcgcaagtttcatttgccaatagtacggttttgatattaggc
gaaaccggcacaggaaaagaattaattgcccgtgccattcataatgcctcaccacgaaaa
gataggttaatggtaaaagtaaattgcgctgcacttccgccaaatcttatcgaaagtgaa
ttatttggccacgaacgtggaagctttacgggagcaacagacagacgaattggcaaattt
gaactggcaaatcacagtacgctatttttagatgaaataggcgaactgtctccggaaata
caagttaaacttcttagagcgctgcaggaaaaagagattgaaagaattggcggaaaaaca
acgatcaagattgatgtaaggatcataactgccaccaaccgcaatttacaaaaagaggtt
gatgagggaaatttcagaaccgatctgttttacaggttaaatgtgttccccataactctg
cctgctttacgaaacaggaaggaagacatcccagcattggctgagtattttgttgctaag
tattcacgaattgcaggaaaaaaaatacgaagtctgtcaaaaaaagtaatgaaagaactg
atgggatacagttggcccggcaatgttagagagttggaacacttgatagaaagaacggtc
ttagtaactgaagtcgacgtcattaaagaaatccatcttccggtactggaacaaagtaaa
attaaaaacaaggaagataatctttatacaaaaacaattcaagaaaatgaacgtgaatat
atactggaggttttaaagcaatgcgagggtagaatatttggaaaaaatggagccgcagaa
gtactaggcgtgccagtatctaccttgaattccaaaataaaaaaactgggtataaaaaaa
gaaaaaatgtttacgaactccgctaaatag
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