KEGG   Lacibacter sediminis: H4075_08340
Entry
H4075_08340       CDS       T06746                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
lacs  Lacibacter sediminis
Pathway
lacs02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lacs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    H4075_08340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lacs03021]
    H4075_08340
Transcription machinery [BR:lacs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     H4075_08340
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_23 HTH_5 Sigma70_ECF HTH_28 GerE DUF134 HTH_10 HTH_11
Other DBs
NCBI-ProteinID: QNA46175
UniProt: A0A7G5XL22
LinkDB
Position
1935105..1935680
AA seq 191 aa
MPNKKPHKSIKDLQRQIAVYEDETAYKELFFILFNSLTRFATGIVQSKEVAEEIVSDVFM
GIWTDRAKLNAIDDLQLYIFIAVKNNSIRKAKQLHKRTTISIDEIDVNMESIYQNPEQRL
ISAESVSRIETAINHLPQRARLIFKLAKEDNMRYKDIATLLNISVKTVDNQLAIALKKIT
TALGAPFRKKS
NT seq 576 nt   +upstreamnt  +downstreamnt
gtgccaaacaagaagccacataaaagtatcaaagatcttcagcggcaaattgctgtttat
gaagatgaaactgcttataaagagttgttctttattctattcaattcgcttacacgcttc
gctacaggtattgttcaatcaaaagaagttgctgaggaaatcgtatcggatgtctttatg
ggtatctggacagaccgggcaaaactcaatgcaattgacgacttgcaactctacatcttt
atagctgtaaaaaataattccatccgcaaagcaaagcaattgcataaacgcacaactatt
tccattgatgagatagacgtgaacatggaatcgatttatcaaaatcccgaacaacggttg
atatcggccgaaagtgttagccgtattgaaacagcgatcaatcatttgcctcaacgggca
cgacttatttttaaactggccaaggaagataatatgcgttataaggatattgctacctta
ctcaatatctctgtaaaaacggttgataaccagctggccattgccctcaaaaagatcaca
accgcccttggcgcacccttccgcaaaaaaagttga

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