Lacibacter sediminis: H4075_08340
Help
Entry
H4075_08340 CDS
T06746
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lacs
Lacibacter sediminis
Pathway
lacs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H4075_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lacs03021
]
H4075_08340
Transcription machinery [BR:
lacs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H4075_08340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
HTH_5
Sigma70_ECF
HTH_28
GerE
DUF134
HTH_10
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QNA46175
UniProt:
A0A7G5XL22
LinkDB
All DBs
Position
1935105..1935680
Genome browser
AA seq
191 aa
AA seq
DB search
MPNKKPHKSIKDLQRQIAVYEDETAYKELFFILFNSLTRFATGIVQSKEVAEEIVSDVFM
GIWTDRAKLNAIDDLQLYIFIAVKNNSIRKAKQLHKRTTISIDEIDVNMESIYQNPEQRL
ISAESVSRIETAINHLPQRARLIFKLAKEDNMRYKDIATLLNISVKTVDNQLAIALKKIT
TALGAPFRKKS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaacaagaagccacataaaagtatcaaagatcttcagcggcaaattgctgtttat
gaagatgaaactgcttataaagagttgttctttattctattcaattcgcttacacgcttc
gctacaggtattgttcaatcaaaagaagttgctgaggaaatcgtatcggatgtctttatg
ggtatctggacagaccgggcaaaactcaatgcaattgacgacttgcaactctacatcttt
atagctgtaaaaaataattccatccgcaaagcaaagcaattgcataaacgcacaactatt
tccattgatgagatagacgtgaacatggaatcgatttatcaaaatcccgaacaacggttg
atatcggccgaaagtgttagccgtattgaaacagcgatcaatcatttgcctcaacgggca
cgacttatttttaaactggccaaggaagataatatgcgttataaggatattgctacctta
ctcaatatctctgtaaaaacggttgataaccagctggccattgccctcaaaaagatcaca
accgcccttggcgcacccttccgcaaaaaaagttga
DBGET
integrated database retrieval system