Lacibacter sediminis: H4075_09920
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Entry
H4075_09920 CDS
T06746
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs03420
Nucleotide excision repair
lacs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4075_09920
03430 Mismatch repair
H4075_09920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacs03400
]
H4075_09920
Enzymes [BR:
lacs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4075_09920
DNA repair and recombination proteins [BR:
lacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4075_09920
MMR (mismatch excision repair)
Other MMR factors
H4075_09920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Dna2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QNA46464
UniProt:
A0A7G5XLW1
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All DBs
Position
2305386..2307989
Genome browser
AA seq
867 aa
AA seq
DB search
MNKRVNITIEELWAIHKFSPNDNQREAILYGEGPLLLTAGPGSGKTRVLLWRTLNLIVFH
AVAPEEIFLATFTEKAAQQLKDGLRTLLGTVTNLTGKPYDISKMSLGTVHSICQSLITDR
RFSSGRVRKNSPILMDSLSQYFKIYQKRFWQELWVSGEFTDEESANLAITKYLLGKEINS
RHVAVTECIALFNRFSEENIIPDAVQTNDVSLRGLLKMYSYYRNSLQINPNTKQVDFSLL
QQEAFTAIENFTHSGNVFKYLIIDEYQDTNAIQEKLYFSLAKGSKNICVVGDDDQALYRF
RGATVENLVEFENRCKQNIGIKPKRIDLDINYRSRKNIVDLYTHFIVQTDWKNPTKKGSH
FRVHDKVIKAHSKDAKPSVVVSERDKADNVYAEIAQLVVDLKRTGKITDYNQCAFLFPSM
KFRGEINTRVAGFQAAFENLGVPVYAPRAGSFVEVDEARAIFGLFLKIFDRPHYGATGSQ
NIIKFRNWMIGCMQYADNLMKEDKLLKEYVEDRKNDVATALADYNLLLALVKKKKWNVKD
PFQFSMIRDFAEVAKLSPKAKKNLTNSYFRKVIELKEKENKPYSIDYIINRTTSLDWTVL
DLFYQLNGFRHFRDMYLLAEDGTDEGPVCNLGLLSQYLSRFMEQYGTLLTASFMSDEKFV
RVFFASYVYALYRLGESEYEDADDPFPKGRVPFLTIHQSKGLEFPVVVLGAVYKGEKPPD
KKEVIVRHLLNKEGEPLDRISHFDNMRMFYVGLSRAQNLLVLPRYTYAAAATDIFKNIFE
NYPLQKIADLDLKHIPVADEAKQDLGKSYSYTSDYLLYNKCPRNYMIFKKYGFVPSRSQT
MLFGSLVHQTIEDLHHLLIYERKNAAV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagggtaaatatcacaatcgaggaattatgggcaatccataagttttcaccg
aacgacaatcaaagggaggccattctttatggggaaggtcctctattgcttactgcaggt
ccgggttcaggcaaaacgagggtacttctgtggcgaacattaaatttaattgtttttcat
gctgtggcgcctgaagagatatttctggcaaccttcactgaaaaagctgctcaacaacta
aaagatggactgcgtacgctcctcggaacagtaactaatcttaccggcaagccttatgat
atttcgaaaatgtcattgggcacagttcactcaatttgtcaatcattgataacagataga
aggttctcttcgggacgtgttcgaaaaaattcccccattttaatggatagcctttcgcaa
tactttaagatttatcaaaaaagattttggcaggaattatgggttagtggtgaatttact
gatgaagaatctgctaacctcgctatcacaaaatatttattaggcaaagagatcaattcc
cgtcatgttgcggtaaccgaatgtattgccctctttaatcgattttctgaagagaatatc
atcccggacgctgtccaaaccaatgacgtttctttgaggggattattaaaaatgtattcc
tattatagaaattcacttcaaattaaccctaacacaaaacaagtcgatttttcactgtta
cagcaagaggctttcacggctatagaaaacttcactcattccggcaatgtattcaaatac
ctgattattgatgagtaccaggacacaaatgctattcaggagaaattatacttttcgttg
gcgaagggttcaaaaaatatttgtgtagtgggtgatgatgaccaagccctgtatcgcttt
cgaggtgctactgtagaaaaccttgttgaatttgaaaacagatgcaagcagaatattgga
ataaaacccaaacggattgaccttgatataaattatcgttcaagaaaaaacatcgtcgac
ctctatacacatttcatcgttcaaacagactggaaaaatccaacaaagaagggaagtcat
ttccgtgtacatgataaagtaatcaaggcacacagcaaggacgccaaaccttcggtagta
gtttcagaaagagacaaagcagataacgtatatgctgaaatcgcccagttggtagtcgat
ttaaaacggactgggaaaattactgactataatcaatgtgctttcctctttccctcgatg
aaattcagaggtgaaattaatacaagggttgcaggttttcaggcagcatttgaaaattta
ggcgttcctgtttacgcaccacgtgcaggaagttttgtagaggtagatgaagcaagggcc
atctttggattgttcctgaaaatattcgatcgacctcactatggcgctacgggcagccaa
aatatcatcaaattccgtaattggatgattggatgtatgcaatatgctgataacttaatg
aaagaagataaactgctgaaagagtatgttgaagatagaaaaaacgatgtagccaccgct
ttagctgattacaatttactgcttgcgttggttaaaaagaagaaatggaatgtaaaagac
cctttccagttttctatgatcagggatttcgcagaagtggcaaaactctcacctaaagcg
aaaaagaatctcaccaattcttacttcagaaaagttattgaactaaaagaaaaggaaaac
aaaccatacagcattgattacatcatcaaccgtactacctcattggattggaccgtattg
gatttattctatcaactaaatggctttcgccatttcagggacatgtatctgctggcagaa
gacggtacagatgaaggtccggtttgcaaccttggcttgctgtcgcaatacctgtcacgg
ttcatggagcaatacggaactttattgactgcatctttcatgtcagatgaaaaatttgtt
cgggtattcttcgcctcgtacgtttatgcattgtatcgccttggtgaaagtgaatacgaa
gatgcagatgatccctttccaaaaggcagggttccttttttaaccattcaccaatcaaaa
ggccttgagtttccggtagtggtattaggtgctgtttacaagggggagaaaccgccagat
aaaaaggaagtaattgtgcggcatttattgaataaagaaggagaacctttagatcgtatt
tctcacttcgataatatgcgaatgttttatgtgggtctttccagggcgcaaaaccttttg
gtattgccccgatatacttatgctgctgcagccacagatattttcaaaaacatttttgaa
aactatccactacagaagattgctgaccttgatttaaagcatatacccgtggcagatgaa
gcgaagcaggatttaggcaaaagctacagttatacttccgactatctgttgtataacaaa
tgcccgagaaattacatgatcttcaaaaaatatggctttgtaccttcccgttcccaaaca
atgctgtttggctcattggtgcaccaaacgattgaagatctgcatcacttattaatttat
gaacgtaaaaacgctgctgtatga
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