Lacibacter sediminis: H4075_11170
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Entry
H4075_11170 CDS
T06746
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs00040
Pentose and glucuronate interconversions
lacs01100
Metabolic pathways
lacs01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H4075_11170
Enzymes [BR:
lacs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
H4075_11170
SSDB
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Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Targ_of_XrtJ
Motif
Other DBs
NCBI-ProteinID:
QNA42669
UniProt:
A0A7G5XB16
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Position
2641574..2642815
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AA seq
413 aa
AA seq
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MKFLSTVALLFATVLSLHAQEVLETGGKKMPDEWIDKDTKHRVVKLTRMEGRSNLSFYFH
NNPFIGNSMVFYSSNKNNVDSVRKQEISTVVSGNRQIHLLDLKTLKSEQLTHHRLPMNGE
IVDNKKGIVYYQIRDTVFCVNAKTKEVKTVFVFPADFKGTVTAINADGTLLGGAKSSDEE
KELFKKYPNKSSYFDIIYEAKLPRTLFTINVKTKELDKVHSDSAWLNHVQFSTTDPNLLM
FCHEGPWHKVNRIWTIDVKTKKITQIHKRIMDMEIAGHEWPSVDGQIIWYDLQQPRSTKF
YVEGHHVKTGQKTKYELQRDEWSIHFNSNKDNSLFCGDGGNSGQVARAKDGMWIYLFKPD
GDKFISTRLVNMKHHNYRLEPNVHFSPDGKWVIFRANFEGIENVYAVEINETK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctctcaacggttgctctgctgttcgctactgtattgtccctgcatgcacag
gaagtcctcgaaaccggcggtaaaaagatgccggacgaatggatcgataaagacaccaaa
catcgtgtagtcaaattaacaagaatggaaggcaggagcaatctcagcttttactttcac
aacaatcctttcatcggcaactcgatggtgttttacagcagcaacaaaaacaatgttgac
agtgtacgtaaacaggaaatttcaactgttgtttccggtaaccgacaaattcatttactt
gatctcaaaacattaaagagtgaacaattaactcatcatcgcttgccgatgaatggcgag
atcgttgataataaaaaaggaatcgtttattaccagatcagggatacggtattttgtgta
aatgcaaaaacaaaagaagtgaaaactgtttttgtttttcctgctgattttaaaggaacg
gtgacggcgattaatgctgatggtacattgttaggcggtgcaaaatcaagcgacgaagaa
aaagaactctttaaaaaataccccaacaagtcaagctacttcgatattatttacgaagca
aagctgccacgtaccttgttcacgataaatgtaaagacaaaagaattagacaaagtgcac
agcgacagtgcatggctcaatcatgtacagttctcaacaaccgatccaaatcttttgatg
ttttgtcatgaaggcccctggcataaagtgaaccgtatctggacgatcgatgtgaagacg
aagaagatcacgcagatccacaaacgcatcatggatatggaaatagcggggcatgagtgg
ccgagtgtggatggacaaattatctggtacgatctgcaacaaccacgcagcacgaaattt
tatgtggaagggcatcacgttaaaaccgggcaaaaaacaaaatatgaattgcagcgtgat
gaatggagtattcatttcaacagtaataaagacaattcattgttttgtggtgatggtggt
aattcaggacaggttgcaagagcgaaagatggtatgtggatctatttattcaaacccgat
ggggataagtttatctcaacccgtttggtgaatatgaagcatcacaattatcgtcttgaa
ccaaatgtgcatttcagtcccgatggtaaatgggtgatcttccgtgccaacttcgaaggc
attgagaatgtctatgccgttgagatcaacgaaacaaaataa
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