Lacibacter sediminis: H4075_11270
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Entry
H4075_11270 CDS
T06746
Name
(GenBank) T9SS type A sorting domain-containing protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
H4075_11270
Enzymes [BR:
lacs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
H4075_11270
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
Por_Secre_tail
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QNA42686
UniProt:
A0A7G5XB33
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Position
2674406..2676427
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AA seq
673 aa
AA seq
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MEKLNRGTVAVRVNSSEVFLSWRLMGTEPSTTSFNIYRDGIKINATALTGATNYKHSTTT
NGTYMVKAVVDGTEESNSVEASVWVQQYKQIPIQQPAGGTTPDAVAYTYTANDASVGDLD
GDGEYEIILKWDPTNSKDNSQSGYTGNVYLDAYKMNGTRLWRIDLGINIRAGAHYTQFLV
YDFDSDGKAEIACKTADGTKDGIGTVIGNATVDYRNSNGYVLSGPEYLTVFNGITGAAMD
TENYTPARGTVSSWGDSYGNRVDRFIAAVAYLDGINPSMVFGRGYYTRLVRSAWDFKNGQ
LVQRWIFDSNTTGNNAYAGMGNHQMTVGDANGDGKDEIYNGSSAVNYDGTGFFANGLGHG
DALHMTDMDPDRPGMELWQCYEEPVKYAGKGLRLFDAATGVPIWGVNATGDIGRALAADI
DPRYKGYECWGSTGYLYNVKGDSVGPSRPTINHAIWWDGDLLREILDDEKLEKWDYANNR
LNRLLTLYLANLGSASSNNSTKANPALTADILGDWREEIIMRSGDNQFLNIYTTVNETTH
RIYTLMHDPQYRLAIAWQNAAYNQPPHPGFYLGDGMSAAPIPNIQLVNAVTTPVSDQTVA
AITVDVFPNPSVKTFFIRANGSFTFHIYDVNGKLQQQGTAVNQIETGTELMAGVYFVKVM
AKKQQTTIKIIKQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactaaatcgtggtaccgttgcggttcgggtgaacagttcggaagtatttctc
agttggcgattaatgggtaccgaaccatcaactacttctttcaatatttatcgggatgga
ataaagatcaatgccacagcattaaccggtgctaccaattacaaacacagtaccacaaca
aacggcacttacatggttaaggctgtagtggacggtacggaagaaagtaatagtgttgaa
gcttctgtgtgggtgcaacagtacaaacagatcccgatacaacaacctgcaggaggtaca
acgcctgatgcggttgcttatacttacacagcaaacgatgcaagcgttggtgatttagat
ggcgatggtgaatatgaaatcattttaaaatgggatcctaccaattcaaaagataattca
caatcgggctataccggtaatgtgtacctcgatgcctataaaatgaacggcaccagattg
tggcgtattgatcttggtattaacattcgtgcaggtgcacattacacacaattcttagtg
tacgattttgacagtgatggcaaagcagaaatagcttgtaaaactgctgatggcacaaaa
gatggtattggtacagtgattggaaatgcaactgttgattatcgtaacagtaatggttat
gtattgagcggaccggaatatttaactgtattcaacggcataacaggtgctgcaatggat
actgaaaattatactcccgcaagaggaaccgtaagcagctggggtgatagttatggtaat
cgtgttgatcgttttattgctgccgttgcttatttggatggaatcaatccaagtatggta
tttggtcgtggctattatacaagacttgtaaggagtgcatgggattttaaaaatgggcaa
ttagtacaacgctggatattcgacagcaatacaaccggcaacaatgcgtacgcaggcatg
ggcaatcaccagatgactgttggtgatgcaaacggcgatgggaaagatgaaatctataac
ggatcaagtgcggtgaattatgatggcaccggtttctttgcaaatggattggggcatggt
gatgcattgcatatgactgacatggatcctgatcgtccgggtatggaattatggcagtgc
tatgaagaaccggtaaagtatgcagggaaaggtttgcgtttgtttgatgcggccacaggt
gtgcccatctggggcgtaaatgcaacaggtgatattggtcgtgcactggcagcggatatt
gatccccgttataaaggatatgaatgttggggctccacaggttatctctacaatgtgaaa
ggcgattcagtcgggccatcacgacctaccatcaatcatgcaatctggtgggacggagat
ctgctgcgtgaaatactggatgatgaaaagctggagaaatgggactatgccaataacaga
ctcaatcgtttattgaccttatatctcgcaaatctgggttcagcttcaagtaacaattca
acaaaagcaaatcctgcgttgacagcagatatattaggcgattggcgggaagagatcatt
atgcgtagcggcgataatcaattcctgaatatctatacaaccgttaacgaaacaacacat
cgcatttatacgctcatgcacgacccgcagtatcgtttggcaattgcctggcagaatgca
gcatataatcaaccaccgcatccgggtttttatctgggcgatggtatgagtgcagcgcca
atacccaatattcaactggtgaatgctgtcactactcctgtaagcgatcaaactgttgcc
gcaataactgttgatgtatttcccaacccttccgtaaaaacttttttcatcagagcaaac
ggaagctttacttttcacatctatgatgttaatgggaagctgcagcaacagggaacagcc
gtaaatcaaattgaaaccggaactgaactgatggccggtgtatatttcgtgaaagtgatg
gcaaagaagcaacaaacaacaattaagatcatcaaacaataa
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