Lacibacter sediminis: H4075_12210
Help
Entry
H4075_12210 CDS
T06746
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs00362
Benzoate degradation
lacs01100
Metabolic pathways
lacs01120
Microbial metabolism in diverse environments
lacs01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
H4075_12210
00624 Polycyclic aromatic hydrocarbon degradation
H4075_12210
Enzymes [BR:
lacs01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
H4075_12210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dioxygenase_C
SdrD_B
CarboxypepD_reg
RM5_Med14
Motif
Other DBs
NCBI-ProteinID:
QNA42857
UniProt:
A0A7G5XBK4
LinkDB
All DBs
Position
2888794..2889438
Genome browser
AA seq
214 aa
AA seq
DB search
MKLIITFTFILLTNVPVSSCAQQQTSKDVKIDPGGCEGCEAIYESPIPFDKLEPMVWLPD
WNLPGQKLAVNGTVYKADGKTPAEGVIIYIYHTDQTGIYPQKGDEKGWAKRHGYLRGWMK
TDKNGFYKFFTLRPGSYPNSKNPAHIHITIKEPGKQEYWIDEFVFDNDPFLTQEERSRLK
NRGGSGILTMKPGGSMVKAERNIYLGKNIPGYPK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttatcatcacattcacatttattcttcttacaaatgtacctgtaagttcctgc
gcacaacagcaaacatcaaaagatgtaaaaattgatcccggtggttgcgaaggatgtgaa
gcgatctacgaaagtccgattccatttgataaattagaaccgatggtatggcttcctgat
tggaatttgccgggacaaaaactggcagtgaacggaacggtgtacaaagctgatggcaaa
acacctgctgaaggagtgatcatttacatttatcacactgatcaaacgggcatttatcct
caaaagggtgatgaaaaaggttgggcgaaacgacatggctatttacgtggctggatgaag
actgataaaaatggtttttataaattctttacacttcgaccaggttcttatcccaacagc
aaaaatccggcgcatattcatatcactattaaagaaccgggcaaacaggaatactggatc
gatgaatttgtgtttgacaatgatccttttctgacgcaagaagaaagaagccgattgaaa
aaccgtggaggaagcggcatccttactatgaaaccgggcggcagtatggtaaaagcagaa
cggaatatttatctcggaaaaaatattccaggttatcctaaataa
DBGET
integrated database retrieval system
