Lacibacter sediminis: H4075_13640
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Entry
H4075_13640 CDS
T06746
Name
(GenBank) AAA family ATPase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lacs03009
]
H4075_13640
03012 Translation factors [BR:
lacs03012
]
H4075_13640
Enzymes [BR:
lacs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
H4075_13640
5.6.2.5 RNA 5'-3' helicase
H4075_13640
Ribosome biogenesis [BR:
lacs03009
]
Eukaryotic type
Other ribosome biogenesis factors
H4075_13640
Translation factors [BR:
lacs03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
H4075_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
DEAD
ResIII
T2SSE
UvrD-helicase
nSTAND3
AAA_22
Helicase_RecD
PhoH
AAA_25
PIF1
SLFN-g3_helicase
AAA_16
UvrD_C_2
NPHP3_N
AAA_24
AAA_5
AAA
ATPase
AAA_7
MeaB
SRP54
ParA
NACHT
HEM4
Flavi_DEAD
CbiA
Motif
Other DBs
NCBI-ProteinID:
QNA43123
UniProt:
A0A7G5XCC0
LinkDB
All DBs
Position
3204214..3206046
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AA seq
610 aa
AA seq
DB search
MHPHINKLLKCIDLEEKEQANRYQLDQSHTLKQLKAEGLALHPIIVTRRTFGYADYPEIS
FKLSFPPEANMFRDGAAIECFISGEEPVKGVLLNLDGKNGEFRLFAPDFPDWIEDNGVGI
KLAPDTRTTSIMKKVLQGLENNKPPYGLFEQLHTTSTQPTSIVQTQTNNIQFRNIKLNES
QQQAIVNIIANDQLCIVHGPPGTGKTTTLIEAIVQLVQQGEKVLVSAPSNTAVDHLAKGL
LQQGINLLRVGNTSKVDELIYKHTPEGKLNNSSALKEIKQLKIRAEEFRKMALKYKRSFG
KSEREQRSLLFKEVKNIRTEIKKLQHYNEEKLFAEAQVIAGTPIGLYDADLKQSFHTLVI
DEAGQCIEPLAWCIFPMAEKIVLAGDHWQLPPTVLSNEAAVLGFNRSILEVAIEKTTTVS
LLNIQYRMRKAIAGFSSSYFYKDLLHTAEHLQNTGVHLTFIDTAGSGYNETHGPDGVSLQ
NEGELNIVRQLLEQEQLDPIHTAFISPYSGQVTKAKEQLPTGLRISTIDSFQGQEKENIV
VSLVRSNEDGDIGFLKDYRRMNVAMTRAKEQLFVIGDSATVGADPFYNKFLSYVEEHGTY
RTVWEFEIQI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgcacataaacaaattactgaagtgtattgatcttgaggaaaaagaacaggca
aaccgttaccagcttgaccaatcgcatacattaaaacaactcaaagcagaagggttagca
ctgcacccaatcattgttacacgcagaacatttgggtatgcagattatcctgagatcagc
tttaaattaagtttcccacccgaagcaaatatgtttagagatggcgctgctattgaatgt
tttatttcaggtgaagaaccggtgaaaggagttttattaaatcttgatggaaagaatggg
gagttccgtttgtttgcacctgactttcccgactggatcgaagacaatggagttggcatt
aaactcgctcctgatacacgcaccacaagtatcatgaaaaaagtattgcagggcttggaa
aataataaaccaccgtacggattatttgaacaactgcatactacttctactcaacccact
tcaatcgttcagacacaaacaaataacattcaattcaggaatataaagctgaatgaaagt
cagcagcaggcaattgtaaacatcatagccaatgatcagctttgtattgtgcatggccct
cccggcacgggtaaaacaactacgcttattgaagcaattgttcagctcgtgcaacaaggt
gagaaagtattagtatcggcaccaagcaatacagctgttgatcacttggcaaaaggatta
ttacaacaaggcattaacctgttacgtgtgggcaatacaagcaaagtagatgaattgatc
tacaaacatacaccggaaggaaaactgaataacagcagtgccttaaaagagatcaagcag
ttaaaaatacgtgctgaagaattcaggaagatggcgttgaagtacaaacgaagttttggg
aagtcggaacgtgaacaacgaagcttgttatttaaggaagtaaaaaacatccgtactgaa
ataaaaaaacttcagcactacaacgaagaaaaattgtttgcagaggcacaggtgattgca
ggaactcccattggattgtatgatgcagatttgaaacaatcgtttcatacacttgtgatt
gatgaagcaggacaatgcattgaaccattggcctggtgtattttcccaatggctgaaaag
atcgtacttgccggtgatcattggcaattacctcctactgtgttaagtaatgaagcagca
gtgcttggcttcaatcgttcgatcttggaagtagctattgaaaaaacaacaacagtttcc
ttattgaatattcaataccggatgcgtaaagccatagcaggtttcagcagcagttatttt
tataaagatctgttacatacggctgagcatttgcaaaacacaggtgtacatttaactttt
attgatactgccggttcaggctataacgaaacccatgggccggacggtgtaagtttacaa
aacgaaggcgagctaaatattgtacgtcagcttttggagcaggagcaacttgatccgatt
catacagctttcatatcgccttattcaggacaggtaacaaaagcaaaagagcaactgcca
acaggtttacgcatcagcaccattgatagtttccagggtcaggaaaaagaaaatattgtt
gtatcgcttgtgcggagtaatgaagatggcgatattggttttttaaaagactaccgcagg
atgaacgtagctatgacaagagcaaaagaacaactctttgtgatcggcgacagtgcaaca
gttggcgctgatcctttctacaataaattcctcagctatgttgaagaacatggaacgtac
agaacagtgtgggagtttgaaatacagatctga
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