Lacibacter sediminis: H4075_15470
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Entry
H4075_15470 CDS
T06746
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lacs03000
]
H4075_15470
Transcription factors [BR:
lacs03000
]
Prokaryotic type
Helix-turn-helix
Other families
H4075_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
GAF
PAS_8
PAS
PAS_4
HTH_8
AAA_5
GAF_3
GAF_2
AAA
AAA_2
PAS_3
Mg_chelatase
MCM
Cas_Csm6_CARF
AAA_3
AAA_19
AAA_16
EcsC
nSTAND3
AAA_7
DUF815
Diguanyl_cycl_sensor
IRK_C
Motif
Other DBs
NCBI-ProteinID:
QNA43471
UniProt:
A0A7G5XDB8
LinkDB
All DBs
Position
3669447..3672191
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AA seq
914 aa
AA seq
DB search
MVDSSDHKQLAESLLAQVADATLGLSGHDFIVELAKKIPPIINMRYCFVVECANKEKTRL
RTVAFVEGDKVLDNIEYNTAESACSMVVNGDAYYLPKGVKKFHQGTAGIEAYVAVPIISK
LTGEMLGHIAASDPNPITDKKNRVAILKIFAAQLASELERMQSEKELEQKKYDIELYRQT
LRNLHEAVFWVNANGNIIEVNEMATHMTGRSRDELLTMKVPELNPSEIVQDFPGFWKKLR
KAKKITFEAKHLHKEGYFYEVEITGNYIEYNGQEFSCSIVRDIRKKKKEEDILRIISEGT
AALTGMDYLQGLTKIVTEVLGVRYALVSECANEEKTRVRTISYVDRKQVLENIEYDLEGT
PCQYVMNGKDYFCADELEKSFPGEKGIQSYIAVPINSPETGEVLGHIAALDSVPMTSDQN
QSNILRIFAARAGAEMDRLAALKKLEELNKALDLSLKESDQRYKDLFEQAPIAYVHEGLD
SKFIKANRAALKILGVKPEEVPFTYGSSLVPNTPDAQQRLNEAFASIGRGTDTSGIVLEL
RRKDTGAPIWIQWWSNPDVGGQFTRTMFIDITERVLMEQEQVRLKAQNQYLQEEIKYNHN
FEDIVSTSKNFHKVLQQIEQVASTDATVLILGESGTGKELIARAIHNISKRNKRPLVKVN
CATLPANLIESELFGHERGAFTGAMERKIGRFELADTGTIFLDEIGELPVELQAKLLRVL
QEGEFERLGNPKTMKVNVRIIAATNRNLQTAIEKKEFREDLYYRLNVFPIITPPLRDRKE
DIPLLLKHFIRKHETKMGRKITEVAPDVLNALHQYSWPGNVRELENLIERALILSKGSVL
EYGDWIPAASGISTAHQTSSSKQTLEDVEKDHIIETLQRTNWKVSGEKGAAKILGLNATT
LEARMKKLGITRPK
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactcgtcagatcataaacaattagcagaaagcctgcttgctcaggtagcagat
gccacccttggtctttctggccatgattttatagttgaactcgcaaagaaaatacctcct
attattaatatgcgctattgctttgttgtagagtgcgccaacaaggaaaaaacaaggtta
cgtaccgttgcctttgttgagggcgacaaagtgctggataatattgaatataataccgca
gaatcagcatgcagtatggtcgtaaatggcgatgcatactatttaccaaaaggtgtcaaa
aaattccatcagggaacagcaggaattgaagcatatgtggccgttcctatcatcagcaaa
ctcacaggtgaaatgcttggtcatattgctgcatcagatccaaacccgataactgataaa
aaaaaccgggtagctattcttaaaatttttgcagcacaactggcaagtgaactggagcga
atgcaatctgaaaaagaactcgaacaaaaaaaatatgacatcgaattataccggcaaacc
ttacgcaatcttcacgaagcagtattttgggtgaatgccaacggtaatatcattgaagta
aatgaaatggcaactcacatgacgggaagaagtcgtgacgaattgctaactatgaaagta
cctgaacttaacccgtctgaaattgttcaggattttcctgggttctggaaaaaactaagg
aaagcaaaaaaaattacgtttgaagcaaaacatcttcacaaagaaggttatttctacgaa
gttgaaataacaggaaattatatcgaatataacggacaggagttttcgtgcagtattgta
agagatatacgtaaaaagaaaaaggaagaagatatattacgcatcatttccgaaggcact
gcagctctcacaggtatggattacctgcaagggctcacaaaaattgttaccgaagtttta
ggtgttcgttatgcacttgtatctgaatgtgccaatgaagaaaaaacgagagtacgtacc
atttcatatgttgatcgtaaacaagtgctggaaaatattgaatatgatcttgaaggcaca
ccttgccaatatgtaatgaatggaaaagattatttctgtgctgacgaacttgaaaaaagc
ttcccgggcgaaaaaggtattcaatcatatatagctgttcccattaacagccctgaaaca
ggtgaagtattgggacatattgctgctctggatagtgtccctatgacgagcgatcagaac
caatcaaacatactccgcatttttgccgcaagagcaggcgctgaaatggacagactggct
gcactgaaaaaactggaagaactcaacaaagcattagaccttagtttaaaagaaagtgat
caacgttataaagatttgtttgaacaggcaccaattgcttatgtacatgaaggtctcgat
tcgaaatttataaaagcaaacagggcggcccttaaaatattaggggttaagccggaggaa
gtgccttttacttatggcagttcacttgtacccaacactcctgatgcacagcaacggctt
aatgaagcgtttgcttctattggaagaggaacggacacaagtggaattgtacttgaattg
aggcgcaaagatacaggagctccaatatggatacaatggtggtcgaacccggatgttggt
ggacaatttacaagaacaatgttcattgatattactgaacgtgtgttgatggaacaggaa
caggtccgtttaaaagcgcagaaccaatatctgcaggaagaaattaaatacaatcacaac
tttgaagatattgtgagcaccagcaaaaactttcataaggtattgcagcaaattgaacag
gtggcttccactgacgcaactgttttaatacttggagaatcgggaaccggaaaggaatta
attgcaagggccattcacaatatcagcaaacgcaacaaacgtcctttggtaaaagtaaac
tgtgctacacttcctgccaatctgatcgaaagtgaattgtttggtcatgaacgaggtgca
tttacaggtgctatggaaagaaagatcggtcgttttgagttggcggatacaggtacaatt
ttcttagatgaaattggagagctgccggttgaattgcaggcaaaactgctgcgtgtattg
caggaaggtgaatttgaacgattgggcaatcctaaaacaatgaaagtaaacgttcgcatt
attgcagctactaatcgaaatcttcaaacagccatcgagaaaaaagaatttcgtgaagat
ctctattaccgcctgaacgttttccccatcatcactccaccattgcgtgaccgtaaagaa
gatattccattactcctaaaacatttcatccgtaagcatgaaacaaaaatgggcagaaaa
ataactgaagttgctccggatgttttaaatgcccttcaccaatacagctggcctggcaat
gttcgtgaactggagaatttaattgaacgtgcattgatcctttcgaaaggttctgtcctt
gaatatggcgattggatacctgcagcttccggaatatcgacagcacatcagacttcgtca
tcaaaacaaaccttagaagatgttgaaaaggaccacatcatcgaaaccttacaaagaacc
aactggaaagtaagtggcgaaaaaggagctgcaaaaattttaggtcttaatgccacaaca
ctggaagcacgtatgaaaaaactcggcatcacaaggccaaaatga
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