Lacibacter sediminis: H4075_17620
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Entry
H4075_17620 CDS
T06746
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lacs
Lacibacter sediminis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lacs03019
]
H4075_17620
03009 Ribosome biogenesis [BR:
lacs03009
]
H4075_17620
Messenger RNA biogenesis [BR:
lacs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H4075_17620
Ribosome biogenesis [BR:
lacs03009
]
Prokaryotic type
rRNA processing factors
H4075_17620
BRITE hierarchy
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GFIT
Motif
Pfam:
RNase_E_G
PIG-L
DnaJ_CXXCXGXG
RNase_E_G_Thio
S1
CpXC
Motif
Other DBs
NCBI-ProteinID:
QNA43874
UniProt:
A0A7G5XEH1
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Position
4147133..4148680
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AA seq
515 aa
AA seq
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MNKELIINSAPTGVEIALLEDKKLVELHQESHDASFTVGDLYLGKVKKLVPGMNAAFVDV
GFEKDGFLHYTDLSPYVRSLLKFTTQSINDKGESISDFGKFQTEAEIIKTGKIGEVLNGK
PNILVQILKEPIAAKGPRLSCEISLPGRFVVLTPFNDIVAVSRKIHSSDERKRLQKIVES
IRTKNFGVIVRTAAEGKNTAELHEDLNNLITMWQQIQKNLKNAVAPSKILGETDKTTSIL
RDLLSADFNRIVVNDKNIYNDARTYIQKVAPDKTEIVTFYQNGSPIFDNFGVTKQVKGSF
GKTVNLASGAYLIIEHTEALHVIDVNSGYKSVSANQEENALQTNMEAAEEIARQLRLRDI
GGIIVVDFIDMKLPDNKRRLAEAMEEFMRADRAKHAILPISKFGLMQITRQRMKPEVNIN
TQEVCPSCNGTGKVSATLVLEDEIEKNISYLVMQKHKELMIAVHPIMEAYLRKGFPSKRM
KWSWKYKQKIKVRANTSYHLTEYHFFDSHDEEIRL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggaactgatcattaattctgctccaaccggagtggaaatagcattgttagaa
gacaagaagctggtagagctgcatcaggaaagtcatgatgccagttttaccgttggcgat
ttataccttggtaaagtaaaaaaacttgtgcctggtatgaatgctgcatttgtggacgtt
ggttttgagaaagatggctttcttcattacaccgacctgagtccctatgtacgctctctc
ctcaagtttaccacacaatctatcaacgataaaggcgaaagcattagtgattttggcaag
tttcaaactgaagccgagatcattaaaacaggaaaaattggtgaagtgctgaatggcaaa
cccaatatccttgtgcagatcctcaaagaacccattgcagcaaaaggcccacgcctcagt
tgtgagatttcgttgccgggtcgttttgttgtacttactccgttcaatgatattgtagct
gtttcacgcaaaatccattcaagtgatgagcgtaagcgtttacaaaagatcgttgaatca
atacgcaccaaaaactttggtgttattgttcgtacagctgctgaaggaaagaatactgct
gaactgcatgaagatctgaacaacctcattactatgtggcagcagatccaaaagaatctg
aaaaatgcagttgctccgtcaaaaattttaggtgaaactgataaaacaaccagcatcctc
cgtgatctgttgagcgctgatttcaaccgaattgttgtaaatgataaaaacatttacaac
gatgcacgcacttatattcaaaaagtagcacccgataaaacagagattgtaaccttctac
cagaatggctctcccatcttcgataattttggtgttaccaaacaggtaaaaggatcattt
ggaaaaacggtgaaccttgccagcggtgcatatctcattatcgaacatacagaagcactc
catgtaattgatgtaaacagtggctataaaagtgtaagtgcaaaccaggaagagaatgca
ttgcaaacgaacatggaagccgctgaagaaattgcacgtcaattgcgtttacgtgatatt
ggcggcattatcgtagttgatttcattgatatgaaactgcccgacaataaacgtcgtttg
gcagaagcaatggaagaattcatgcgtgccgacagagccaagcatgcgattcttcctatt
tctaaatttggcttgatgcagatcacccgccagcggatgaaacctgaagtgaacattaac
acacaggaagtttgtccgagctgtaatggtaccggtaaagtttctgcaacattagtgctt
gaggatgaaattgaaaagaacatcagctatctcgttatgcaaaagcataaggagttgatg
attgcagtgcatccgatcatggaagcatatctacgtaaaggtttcccgtcgaagcgcatg
aagtggagctggaaatacaaacagaaaattaaggtgagagcgaatacttcttatcacctt
acagaatatcatttcttcgatagccacgacgaagaaataagactctaa
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