Lacibacter sediminis: H4075_17910
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Entry
H4075_17910 CDS
T06746
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H4075_17910 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lacs01007
]
H4075_17910 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lacs03016
]
H4075_17910 (serS)
Enzymes [BR:
lacs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
H4075_17910 (serS)
Amino acid related enzymes [BR:
lacs01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
H4075_17910 (serS)
Transfer RNA biogenesis [BR:
lacs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
H4075_17910 (serS)
Prokaryotic type
H4075_17910 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
TACC_C
YlqD
ANAPC15
GPD_NAD_C_bact
ERM_helical
Allexi_40kDa
FapA
Motif
Other DBs
NCBI-ProteinID:
QNA43929
UniProt:
A0A7G5XEM6
LinkDB
All DBs
Position
complement(4213339..4214610)
Genome browser
AA seq
423 aa
AA seq
DB search
MLQLAFIRQNRELVKERLAVKNFASLDLVDEIIALDEQRRKKQLENDDLAAKVNAASKEI
GMLMGKGQKAEAEQKKTEVTQYKESSKQIAEELASVEQKLNELLVRLPNLPSTLVPLGKT
AEDNVNVKESGDEPVLPANAKPHWELIEQYDIVNFELGVKITGRGFPVYKGKGAKLQRAL
ISYFLDYNTAAGYTEYIPPYMVNEASAYGTGQLPDKEGQMYHMQEDNFYMIPTAEVPVTN
IYRDEIVKENDLPIKMTAYTPCFRREAGSFGADVRGLNRVHQFDKVEIIQLVHPDKSYEV
LDEMVAHVEKLLQNLGLKYRILRLCGGDMSFTSALTYDFEVWSAAQKKWLECSSVSNFEN
YQTNRMKVRFKDENGKMQLVHSLNGSSLALPRILAALLENNQTENGINIPEVLQSYFGAD
VLN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttacaattggcatttatccgccagaacagggaattggtgaaagaacgcctggccgtg
aaaaactttgcaagtcttgatctggttgatgaaatcattgcattagatgaacagcgtcgt
aaaaagcagctggagaacgatgacctggcagcaaaagtaaatgcagcttccaaggaaatt
ggtatgctcatggggaaaggacaaaaagcagaagccgagcaaaagaaaacggaagtaaca
cagtataaagaatcatccaaacaaattgcagaggaactcgcatcagttgaacaaaagctg
aatgagttgctggtgcgtttgccaaatcttccatcaacattggttcctttaggtaaaaca
gctgaagataacgttaatgtaaaagagagtggagacgaacctgtattacctgcaaatgca
aaaccgcattgggagttgattgagcaatacgatattgtcaattttgagttgggtgtgaaa
atcaccggcagaggttttcctgtttacaaagggaagggtgcaaaattgcaacgtgcactc
atcagttattttttggattataatactgcagcaggttataccgaatacatcccgccttac
atggtgaatgaagcatctgcttacggtaccggtcaactgcccgataaagaaggacagatg
tatcatatgcaggaagataatttttacatgatccccactgcagaagtacctgttaccaat
atttaccgtgatgagatcgtaaaagaaaatgatttgccaatcaagatgactgcttatact
ccttgtttccgtagagaagcgggaagttttggtgcggatgttcgtgggttgaatcgtgta
catcagttcgataaagtggagattattcaattagtgcatcccgataaaagttatgaagtg
ctggatgaaatggtagcacatgttgagaagctgttacagaatctcggcttgaaataccgc
atcctgcgtttgtgtgggggcgatatgagttttacttcagcacttacctatgattttgaa
gtttggagtgctgcacaaaagaaatggttagaatgcagcagcgtcagcaactttgaaaac
taccaaaccaaccgcatgaaggttcgttttaaagatgagaatggtaaaatgcagttagtt
cattcattgaacggaagttcattggctttgcccagaatattggctgcactgctggaaaat
aatcaaacagaaaatggaatcaacataccggaagtattacaatcttattttggtgcagat
gtactgaactaa
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