Lacibacter sediminis: H4075_20350
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Entry
H4075_20350 CDS
T06746
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs03030
DNA replication
lacs03410
Base excision repair
lacs03420
Nucleotide excision repair
lacs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4075_20350 (polA)
03410 Base excision repair
H4075_20350 (polA)
03420 Nucleotide excision repair
H4075_20350 (polA)
03440 Homologous recombination
H4075_20350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lacs03032
]
H4075_20350 (polA)
03400 DNA repair and recombination proteins [BR:
lacs03400
]
H4075_20350 (polA)
Enzymes [BR:
lacs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4075_20350 (polA)
DNA replication proteins [BR:
lacs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H4075_20350 (polA)
DNA repair and recombination proteins [BR:
lacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H4075_20350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4075_20350 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNApol_Exo
HHH_5
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNA44386
UniProt:
A0A7G5XFY3
LinkDB
All DBs
Position
complement(4810278..4813199)
Genome browser
AA seq
973 aa
AA seq
DB search
MANDKKVFLLDAFALIFRAYYALIRSPRNTSKGKNTNAQFGFTNALIELITKQKPSHMAV
CFDTAAPTERHTDFAEYKANRQEAPEDLLLAIPDIKRIIKGFNIPVIESDGYEADDVIGT
LSKLGEAAGYEVFMVTPDKDYGQLVTEKVKIYKPAYQGGDVEIMGPEEVCAKWGIKNVSQ
VIDILGMMGDSVDNIPGIPGVGEKTAAKLLAEYETLENVLANAANIKGKMGEKVAAGKDL
AIMSKKLATIITNVPVEFHEEDFRLKEWNKEELAAVFAELEFKTIGKRILGDDFNAFSTA
PVGVQKDLFGNVIDTTMGEVRKEKKAPPKSAQTEIFASTDATEAEETAEQEEGTAVLDLG
ASKNINNTPHEYIAVTTEVAMQELVAELSTQKEICFDTETTGIDANDCEIVGMSFSYQPH
KAWYVPCPVDQSETKKVLSIFKPLFDDESKTWIGQNIKYDLLVLKWYDVELKGPLFDTML
AHYVVEPEGKRSMDELSAQFLGYEPVHIEELIGKKVPKNSTSKQQGTMRDVELEKITDYA
AEDADITLQLKQSLFPLLKEKEVERVFYEVENPLVKVLTDMEFEGIRVDVDFLNEYSKQL
DKDAKEAEQRVYSSSGLKFNLASPKQLGEVLFDHLKLDPKAKKTKTGQYATGEDVLLKLA
HTSPIVEDILAFRELTKLKSTYVDALPQLINRKTGRVHTTYGQAVAVTGRLASNNPNLQN
IPVRTERGREIRKAFVPRDENHVLVSADYSQIELRIVAAISGDPAMCDAFIQGKDIHTAT
AAKVYKIEEKDVTKEMRYKAKSVNFGIIYGQGAFGLADNLGISRTEAKEIIDNYKREFAG
IQKYMDDTVNFAREHGYVQTLMGRKRWLRDINSSNFTVRGYAERNAINSPIQGTAADMIK
LAMIKTHDALKKSTFKSKMILQVHDELVFDVLKEEAEGIKALIIECMQTAMPLTHGVPVI
AEAGTGDNWLEAH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgataaaaaagtttttctgctcgatgcgtttgctctcatcttccgtgcatat
tatgcacttattcgtagtccacgtaatacatccaaaggaaaaaacaccaatgcacagttt
ggtttcaccaatgcattgatcgaactcattaccaaacaaaagccatcacacatggccgtt
tgttttgatacggctgcaccaaccgagcgccacaccgattttgcagaatacaaagccaac
cgccaggaagctcccgaagatctgttgctggctatccccgacattaagcgcatcattaaa
ggatttaatattccggtaattgaaagcgacggctatgaagcggatgatgtgatcggtaca
ttaagcaaactgggtgaagctgccggttacgaagtgtttatggttacgcccgacaaagat
tacggtcagcttgtaaccgaaaaagtaaaaatttataaacctgcataccaaggtggtgat
gtagagatcatgggtcccgaagaagtgtgtgccaaatggggaattaaaaatgtgagccag
gtaattgatatactcggtatgatgggtgattcggttgataacattcccggcatacctggt
gtgggcgaaaaaaccgcagctaaactgttggctgagtatgaaacattagaaaatgtattg
gccaatgctgctaacattaaaggaaagatgggcgaaaaagttgcagcaggaaaagatctt
gctatcatgagtaaaaaactcgctacaattattaccaatgtacctgttgaatttcatgaa
gaagattttcgtttgaaagaatggaacaaagaagagttggcagcagtgtttgcagaactg
gaattcaaaacaattggcaaacgaattttaggtgatgactttaatgcattcagcacagca
cctgttggcgtacagaaagatctgttcggtaatgtgatagacaccacaatgggcgaagtg
cggaaagaaaagaaggcgccaccaaaatctgcacaaacagaaatctttgcgtcaactgat
gctacagaagctgaagaaactgcagagcaggaagaaggcactgctgtgttggatcttggc
gcttcaaaaaatatcaataatactccacacgaatacatcgccgtaacaacggaagtggca
atgcaagaattggttgctgagttatcaacacaaaaggaaatttgttttgataccgagaca
acaggcattgatgcaaatgattgtgaaatagtaggaatgagtttttcgtaccagccacat
aaagcatggtatgttccttgccctgttgatcagtcagaaacaaaaaaagtgctgtccatt
tttaaaccgttgtttgatgatgaaagcaaaacatggatcgggcagaatatcaaatacgat
ctgttggtattgaaatggtatgatgttgaattgaaaggtccgctgtttgataccatgctg
gcgcattatgttgtggagcctgaaggtaagcgcagcatggatgagttgagcgcacagttt
cttggttatgagcctgtacatattgaggagctgatcggcaaaaaagttccaaaaaactct
acttctaaacaacagggaaccatgcgtgatgtggagttagagaagatcactgattatgca
gccgaggatgccgatatcactttgcaattaaaacaatccttatttccattgttgaaggaa
aaagaagtagagcgtgtgttttatgaagtagaaaatccattggtgaaagtgctcaccgat
atggagtttgaaggaatcagagtggatgttgatttcttaaatgaatattccaagcaactc
gataaagacgccaaagaagctgaacaacgggtatacagttcttccggtttgaaattcaac
cttgcttcaccaaaacagttaggtgaagtattgttcgatcatttaaaactcgatcccaaa
gcgaagaaaacaaaaacaggacagtatgcaacaggcgaagatgtattgctgaagttggcg
cacacaagccctatcgttgaagatattcttgcattccgtgagttgacgaaattaaaatca
acgtatgttgatgcattgccacaactgattaatcgtaaaacaggaagagtacacactaca
tatggacaagctgttgcagtaaccggtcgcttggcaagtaataatcccaacttgcagaat
attcctgtacgtacagaacgtggaagagaaattcgtaaagcatttgtaccaagagatgag
aatcatgtgttggtgagtgccgactattcacaaattgaattgcgtattgttgccgctatc
agtggcgacccggctatgtgcgatgcatttattcaaggaaaagatattcatacagcaact
gcagccaaagtatacaagatcgaagagaaagatgtaaccaaagaaatgcgttataaagcc
aagagtgtaaactttggtatcatttacggacaaggtgcatttggtctggccgataattta
ggcatcagcaggacagaagcgaaagagatcattgataactacaagcgggaatttgcaggt
attcaaaaatatatggatgataccgtgaactttgcacgtgaacatggctatgtgcaaacc
ttgatgggccgcaagcgttggttacgggatattaactcgagcaactttactgtacgtggt
tatgcagaacgaaatgccatcaactcacccatacagggaacagcggccgatatgatcaaa
cttgcaatgatcaaaacacatgatgcattaaaaaagagtacattcaaaagtaaaatgatc
ctgcaggtgcatgatgaattggtatttgatgtcttgaaggaagaagcagaaggtatcaaa
gcattgatcattgaatgtatgcaaactgctatgccgcttacacatggagtaccggttatt
gcagaagcaggaacaggtgataactggttagaagcccattaa
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