Lactococcus allomyrinae: D7I46_00550
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Entry
D7I46_00550 CDS
T05686
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lact
Lactococcus allomyrinae
Pathway
lact03410
Base excision repair
lact03430
Mismatch repair
lact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7I46_00550 (recJ)
03430 Mismatch repair
D7I46_00550 (recJ)
03440 Homologous recombination
D7I46_00550 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lact03400
]
D7I46_00550 (recJ)
DNA repair and recombination proteins [BR:
lact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D7I46_00550 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D7I46_00550 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D7I46_00550 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYF99710
UniProt:
A0A387BMF1
LinkDB
All DBs
Position
95544..97760
Genome browser
AA seq
738 aa
AA seq
DB search
MIQSKYTWKITETVLPEEFKKLTKKYKLDELTSNILYSRGIRDADTIENFLRPSLEELHD
PFLLHDMKKATDRILSAVENGENILIYGDYDADGMTASSVMKTALDELGAEVQVYLPNRF
TDGYGPNLDVYQYFINNESIDLIITVDNGVAGFDAIEWAQNHDVDVIVTDHHSMPETLPN
AYAIVHPEHPDSVYPFKYLAGVGVAFKVACALLEYIPSEMLDLVAIGTIADMVSLTDENR
ILVAHGLKELARTERAGLQELMKIAGCDFGKITEETVGFQIAPRLNALGRLDDPNPAIEL
LTGWDEEAATSIAQMIDEKNNERKSIVDKIYQEASEMLTDDPVQILYHENWHKGVLGIVA
GRLLEKIHKPIIMLAEEDGILRGSARSIEAFDIFKALDSHRELFIAFGGHKQAAGMTLSI
ENVEKLEQVMIDFIMDNNIDMSGKTVLELSGTCELDRLSLSTINNLEALAPFGMNNPKPR
FLVENYKVTQSRSMGKDNSHLKLKIEQNKAQIDAVYFGHGAEELEFEQAETKLAVMLSSN
SWNGNTTVQLMVEDAQAVGIELLDIRSKQINFPENTKIFAKNELKHGIMEDVLVVDEVPS
SHTGLSALTEALSAGNKLIYFKNKIDKNYYLTGSGTREQFAKLYKAIYQFPEFDVRYKLR
NLADYLKIPELLLVKMIQIFEELGFVKIDNGLMTVEKNAAKREISESKIYQELQETVKWQ
ELFALAPVKEIYQKLTEK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgattcaatcaaaatatacatggaaaatcactgaaacagtgcttccagaagaattcaaa
aaattaacaaaaaaatataaattagatgagctgacaagcaatattctctacagtaggggc
attcgggatgctgatacgatagagaattttttgcgtccaagtttggaagaacttcatgac
ccatttttacttcatgacatgaaaaaagctactgacagaattctgtcagcagtagaaaat
ggtgaaaatatcctgatttatggggattatgatgctgacggaatgacagcaagttcagtt
atgaaaacagcgcttgatgaactgggcgcagaggttcaagtttatctgcctaatcgtttt
acagacggatatggccccaatcttgatgtttatcaatattttatcaacaatgaatctatt
gatttgattattactgtggataatggcgttgcaggttttgatgcgattgaatgggcccaa
aatcatgatgttgacgtgattgtcacagatcatcatagtatgccagaaactttgccaaat
gcttatgcgattgtgcatccagagcatcctgatagtgtttatccattcaagtatctagcg
ggggttggggttgctttcaaagtcgcctgtgcgcttttggaatatattccaagtgaaatg
ttagatttggttgctattggtacaatcgctgatatggtcagcttgactgatgaaaatcgg
attttagttgcacatggtctaaaagaacttgctagaaccgaacgtgcaggtctacaagaa
ctgatgaagattgctggctgcgattttggaaaaattactgaggaaactgttggtttccaa
attgcaccgcgccttaatgcgcttgggcgcttagatgaccctaatcctgctattgagcta
cttactggctgggatgaagaagcggcgacatccattgcgcagatgattgatgaaaaaaat
aatgagcgcaaatcaattgtggataaaatctatcaggaagcatcggaaatgttgactgat
gaccctgttcaaattctctatcatgaaaattggcataagggtgttctcggcattgtcgcg
ggcagacttttggagaaaatccataagcctatcattatgctagcagaagaagatgggatt
ttacgtggctctgcacgctcgattgaagctttcgatatttttaaagcactggattcacat
cgggagttatttatcgcttttggtggacataaacaagcggctggcatgacgctctctatc
gaaaatgttgagaagcttgagcaagtaatgatcgactttatcatggacaataacattgat
atgtctggaaaaacggtgcttgaactttcgggaacttgtgaattggatcgtctctcattg
agtactataaataatttggaggcacttgctccatttggtatgaataaccctaaacctcgc
ttcctcgtggaaaattataaagtaactcaaagtcgtagcatgggtaaagacaacagccat
cttaagcttaaaatcgagcaaaataaagcgcaaattgatgcagtttactttggacatggc
gcagaagaattagaatttgagcaagctgaaacaaaactagctgtgatgctatcaagtaat
agttggaacggaaacacgaccgtacaactcatggttgaagacgcccaagccgttggaata
gagcttcttgacattcggagtaagcaaattaattttccagaaaacacaaaaatttttgca
aaaaatgagttaaaacatggtataatggaagacgtgcttgttgtagacgaggttccaagt
tctcacacaggtctgtcagcactgacggaagccttgtcagcaggaaacaagttgatttat
ttcaaaaacaagattgataaaaattactatcttactggtagtggaacgcgagagcaattt
gcaaagttgtataaagcaatttatcagtttcccgaattcgatgtacgatataagctgcga
aacttagctgattatttgaaaattccagagcttttactagttaagatgattcaaattttc
gaggagcttggttttgtcaaaattgacaacggcttaatgactgtggaaaagaacgcagca
aaacgtgaaatttccgaaagtaagatttatcaagaacttcaggaaacggttaagtggcaa
gagctttttgcgcttgcgccagtcaaagaaatttatcaaaaactaacagaaaaataa
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