Lactococcus allomyrinae: D7I46_01960
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Entry
D7I46_01960 CDS
T05686
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lact
Lactococcus allomyrinae
Pathway
lact03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7I46_01960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lact03400
]
D7I46_01960
Enzymes [BR:
lact01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
D7I46_01960
DNA repair and recombination proteins [BR:
lact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
D7I46_01960
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF3574
Motif
Other DBs
NCBI-ProteinID:
AYF99961
UniProt:
A0A387BD50
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All DBs
Position
complement(383445..384302)
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AA seq
285 aa
AA seq
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MKYKFISWNIDSLNAALTGTSERAALSLAVVKQLADAKPDVLAIQETKLPSSGPKKAHLE
VLEDLFADYNIVWRSSNEPARKGYSGTMFLYKKNLPEPIVTYPEIGAPSPMDFEGRIITL
EFPDFFVTTVYTPNAQEGLTRLDLRGIWDDKYREYLKSLDAQKPVFACGDFNAAYTEIDL
ANPKGNRNTAGFTDQEREKFGLLLASGFTDSFRKIHGDIERFYTEGRSLYTWFAQRAKTS
KINNSGWRIDYWLVSNRIAEQLLTSEPMDSGERLDHIPILLEFEI
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaaatttatctcatggaacattgattctctcaatgcagcactaacaggcact
tctgaacgggcagcattatcactcgctgttgtcaaacaacttgctgatgcaaaacccgat
gttcttgctattcaagaaacaaaacttccttcatcaggccctaaaaaagcccatcttgaa
gtgctagaagacctatttgcagactataatattgtttggcgttcatctaatgaacctgct
agaaaaggttattcaggtacaatgttcctctacaaaaagaacttacctgaacccattgtc
acttatccagaaattggagcacccagtccaatggattttgaaggtcgcatcattaccctt
gaatttcctgatttctttgtcacaacggtctatacgccaaatgctcaagaagggttaaca
cgcttagatttacgaggaatttgggatgataaataccgtgagtatctgaaaagtttggat
gctcaaaaacctgtatttgcttgtggtgactttaatgctgcctatactgagattgacctt
gccaatccaaaaggaaaccgtaatactgccggttttacagatcaagagcgtgaaaaattt
ggtttacttttagccagtgggtttaccgatagtttccgtaaaattcatggtgatattgag
cgcttttacacagagggacgtagcctttatacttggtttgcccaacgcgcaaaaacttca
aaaatcaataattctggttggagaatcgactactggctcgtttccaaccggattgctgaa
cagcttctaacttctgaaccaatggattctggagaacgcttggatcacattcctatttta
ttagaatttgaaatttaa
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