Lactococcus allomyrinae: D7I46_03855
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Entry
D7I46_03855 CDS
T05686
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lact
Lactococcus allomyrinae
Brite
KEGG Orthology (KO) [BR:
lact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lact03032
]
D7I46_03855 (topA)
03400 DNA repair and recombination proteins [BR:
lact03400
]
D7I46_03855 (topA)
Enzymes [BR:
lact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D7I46_03855 (topA)
DNA replication proteins [BR:
lact03032
]
Prokaryotic type
DNA Topoisomerases
D7I46_03855 (topA)
DNA repair and recombination proteins [BR:
lact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7I46_03855 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
C1_2
DUF2996
DUF5091
Motif
Other DBs
NCBI-ProteinID:
AYG00296
UniProt:
A0A387BGN7
LinkDB
All DBs
Position
complement(805642..807774)
Genome browser
AA seq
710 aa
AA seq
DB search
MPTAIKNKTKTTSKKKVTRKKVTPGKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDL
KKSSMSVDIEHDYEPQYINIRGKAPLINSLKKEAKAAKAVYLASDPDREGEAISWHLAHI
LDLPLEEKNRVVFNEITKDAVKNAFKEPRQIDVDLVDAQQARRVLDRLVGYSISPILWKK
VKKGLSAGRVQSIALKLIVDRENEINAFIPQEYWTIDGEFKKGTKKFKASFWGIDGKKRA
LDNNEDVIEVMQRLDGPDFNVDKVERKERRRNAPLPYTTSSMQQDAANKINFRTRKTMMV
AQQLYEGLTLGSQGHQGLITYMRTDSTRISPVAQNAAHNYIADKFGEKYSKHGSKVKNAA
GAQDAHEAIRPSNVFNTPELIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVNLSQN
GVTFVANGSQVKFDGYLTIYNDSDKSNMLPEMEENETVKKVSTKPEQHFTQPPARYSEAT
LIKTLEENGVGRPSTYAPTLETIQKRYYVRLVTKRFEPTELGEIVNKLIVEFFPNIVNTE
FTAEMEKDLDEVEEGKRKWVEVVDQFYKPFAKELNNAEQGMEKIQIKDEPAGFNCDVCGS
PMVIKLGRFGKFYACSNFPDCRNTKAIVKDIGVKCPICHEGNIIERKTKKNRLFYGCDRY
PDCDFTSWDKPIGRDCPKSGDFLVEKKVRGGGKQVVCSNAECDYQEEKQK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagcaattaaaaataaaacaaaaactacatctaagaaaaaggtaactagaaaa
aaagttaccccagggaaaaatctcgttattgtagagtcccctgccaaagctaaaacaatt
gaaaaatatcttggtcgcaattataaagttgtagccagtgtgggacatattcgtgacctc
aaaaagtcttcaatgtctgttgatattgaacatgactatgagccacaatatatcaatatc
agagggaaagcccctctaataaattcactcaaaaaagaagctaaagcggctaaagctgtt
tatctcgcgagtgacccagaccgtgaaggtgaggcaatttcatggcatttagcacatatt
cttgacttaccacttgaagaaaaaaatcgtgtcgtctttaatgaaattacaaaagatgcc
gtgaaaaatgcttttaaagaaccacgtcaaattgacgtagatcttgttgatgcccagcaa
gcacgccgtgtacttgaccgtctggttggttattcaattagtccaatcctatggaagaaa
gttaaaaaagggttgtccgcaggacgtgtccaatccattgcactaaaacttattgtagac
cgagagaatgaaatcaatgcttttattcctcaagaatactggacaattgatggtgagttt
aaaaaaggaactaaaaaatttaaagcatcattttggggaattgatggcaagaaacgtgcg
cttgataacaatgaagatgttatagaagtgatgcaacgtttggatggtccagactttaat
gttgacaaagtagagagaaaagaacgtagaagaaatgcacctcttccttatacaacttcg
tctatgcaacaagatgcagcaaataaaattaattttcgaacacgaaaaacaatgatggtc
gctcaacagctctatgaaggtctcacactaggaagtcaaggacatcaaggactgattacc
tatatgcgtacggattctactcgaatttctcctgtggctcagaatgctgctcataattat
attgctgacaaattcggtgaaaaatatagtaagcatggttcaaaagttaaaaatgctgca
ggtgcacaagatgctcatgaggcaattcggccatcaaatgtttttaatacaccggaactc
attgctaaatatttagataaagatcagctcaaactttatacacttatttggaatcgtttt
gttgctagtcaaatgacagccgctgtttttgacactatgaaagtgaacttatcacaaaac
ggggtcacttttgtagctaatggttcacaagtaaaatttgatggttatctcactatttat
aatgactctgataagtcaaatatgctccctgaaatggaagaaaatgaaaccgttaagaaa
gtttctacaaaacctgaacaacattttacgcaaccccctgcacgatactctgaagctact
ttaattaagacattagaagaaaatggtgtcgggcgtccatcgacgtatgctccaacatta
gaaacaatacagaagcgatattacgtaaggttagttacaaaacgttttgaacctaccgaa
ttaggagaaattgtaaataaacttattgttgaatttttccctaatattgtaaatactgag
tttactgctgaaatggaaaaagaccttgatgaagttgaggaaggcaaacgtaaatgggtt
gaagttgttgatcagttttataaaccatttgctaaagaacttaacaatgcagaacagggc
atggaaaaaattcaaatcaaagatgaacctgctggtttcaactgtgatgtttgtggcagc
ccaatggtcatcaaactcggtcgttttggtaagttctatgcttgtagcaacttcccagat
tgtcgtaacacgaaagcaattgtcaaagatattggtgtgaaatgccctatatgtcatgag
ggaaatatcattgagcgtaaaactaagaaaaatcgtcttttctatggttgtgaccggtat
ccagattgtgattttacaagttgggataagcctattggtcgggattgccctaaatctggt
gattttcttgttgagaaaaaagtacgcggtggcggtaaacaagttgtatgttctaatgct
gagtgtgattatcaagaagaaaaacaaaaataa
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