Lactococcus allomyrinae: D7I46_07515
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Entry
D7I46_07515 CDS
T05686
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lact
Lactococcus allomyrinae
Pathway
lact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7I46_07515 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lact03019
]
D7I46_07515 (rny)
Messenger RNA biogenesis [BR:
lact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7I46_07515 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
AYG00953
UniProt:
A0A387BB20
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All DBs
Position
complement(1634374..1635969)
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AA seq
531 aa
AA seq
DB search
MNIISIVLLVLLVVLVVAFIFYAQNIKKNKQDADSLFNEAENKANEVMASAKREAELLKK
EAETFKKEARYTLREEEQKQRREIEDEFKQERKELKETEKRLKQREEILDRKDDTLTQKE
KNLDSKEENLVRKTDTLSKREEQLTHIEEKKRLELERISSLSTDDARDIILSETRDGLTK
EMAQIIKSSEEKAHAEADKRAKNIISLAIQRVSSDSVAEQTVSVVNLPDDGMKGRIIGRE
GRNIRTFEALTGIDVIIDDTPEAVVLSGFDPIRREIARMTLEQLVQDGRIHPARIEELVE
KNRKALDHKMREYGEQAAFEVGAHNLHPDLMKIMGRLHFRTSYGQNVLDHSVEVAHIAGN
LAAEMGENVALAKRAGFLHDIGKALDHEVEGSHVEIGTELARKYKENPVVINAIASHHGD
TDPMSNIAVLVAAADALSAARPGARRESIENYIKRLKDLEAISTSFDGVETAFALQAGRE
IRVMVKPDKLSDDKMTVLARDIKNRIENEMDYPGNIKITVIRETRAVDYAK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatttctatcgttcttttggtcttattggttgtattagttgtcgctttcatt
ttttacgctcaaaatatcaagaaaaataagcaagatgctgattctctttttaatgaggcg
gaaaataaagcaaatgaggttatggcgagtgctaaacgtgaagcagaacttctgaaaaag
gaagcagagactttcaaaaaagaagcacgttacacgcttcgtgaagaagaacaaaagcaa
cgtcgtgaaatcgaagatgaatttaagcaagaacgtaaggagttaaaggagactgaaaaa
cgcctaaaacaacgtgaagaaatcttggaccgcaaggatgataccttgacgcaaaaagaa
aaaaacttagattctaaagaggagaacctcgttagaaagactgatacgctcagtaagcgc
gaagaacaattaacgcatattgaagaaaagaaacgtctggagttggagcgtatctcaagt
ttgagcactgatgatgctcgtgatattatcctctctgaaacacgagatggtttgaccaaa
gagatggcacagattattaagagtagtgaggagaaagcacacgctgaggctgataaacgt
gctaaaaatattatctctcttgcaattcaacgtgtctcatcggattctgtggctgaacaa
acagtgtcagttgttaatttaccagatgatgggatgaagggacgaattattggtcgtgaa
ggtcgtaatattcgtacttttgaagctctgactgggattgatgtcatcattgatgataca
ccagaagcagttgtactttctggttttgacccaattcgtcgtgagattgctcggatgact
cttgaacagctcgttcaagatggtcgtatccaccctgctcgcattgaggaattggtagag
aaaaatcgcaaagcgctagatcataagatgcgtgaatatggtgagcaggcagcctttgaa
gttggtgctcacaatctccaccctgatttgatgaagattatgggacgtttacatttccgt
acatcttatgggcaaaatgtgttagatcactcggttgaggtggctcatattgctggtaat
ttggctgctgagatgggagaaaatgtagcactcgctaaacgggcaggtttcttacatgat
attggtaaggcacttgatcatgaagttgagggaagccatgttgaaatcggaacagagctt
gctcgtaagtacaaggaaaatccagtggtcatcaatgcgattgcaagtcaccacggggat
actgaccctatgagtaatattgctgtgttggtcgctgctgcggatgctttgtctgctgca
cgccctggtgctcgtcgtgagtctattgagaactatatcaagcgtttgaaagaccttgaa
gcaatctcaacaagctttgacggtgttgaaactgcctttgctttacaggcaggtcgtgag
attcgtgtaatggttaaacctgacaagctttcagatgataagatgaccgtgcttgcgcgt
gacatcaaaaatcgtattgaaaatgagatggattatcctggtaatatcaaaattactgtt
atccgtgaaactcgtgcagttgactacgctaaataa
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