KEGG   Lactococcus allomyrinae: D7I46_07515
Entry
D7I46_07515       CDS       T05686                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lact  Lactococcus allomyrinae
Pathway
lact03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lact00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D7I46_07515 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lact03019]
    D7I46_07515 (rny)
Messenger RNA biogenesis [BR:lact03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D7I46_07515 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD tRNA_anti-like
Other DBs
NCBI-ProteinID: AYG00953
UniProt: A0A387BB20
LinkDB
Position
complement(1634374..1635969)
AA seq 531 aa
MNIISIVLLVLLVVLVVAFIFYAQNIKKNKQDADSLFNEAENKANEVMASAKREAELLKK
EAETFKKEARYTLREEEQKQRREIEDEFKQERKELKETEKRLKQREEILDRKDDTLTQKE
KNLDSKEENLVRKTDTLSKREEQLTHIEEKKRLELERISSLSTDDARDIILSETRDGLTK
EMAQIIKSSEEKAHAEADKRAKNIISLAIQRVSSDSVAEQTVSVVNLPDDGMKGRIIGRE
GRNIRTFEALTGIDVIIDDTPEAVVLSGFDPIRREIARMTLEQLVQDGRIHPARIEELVE
KNRKALDHKMREYGEQAAFEVGAHNLHPDLMKIMGRLHFRTSYGQNVLDHSVEVAHIAGN
LAAEMGENVALAKRAGFLHDIGKALDHEVEGSHVEIGTELARKYKENPVVINAIASHHGD
TDPMSNIAVLVAAADALSAARPGARRESIENYIKRLKDLEAISTSFDGVETAFALQAGRE
IRVMVKPDKLSDDKMTVLARDIKNRIENEMDYPGNIKITVIRETRAVDYAK
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgaacattatttctatcgttcttttggtcttattggttgtattagttgtcgctttcatt
ttttacgctcaaaatatcaagaaaaataagcaagatgctgattctctttttaatgaggcg
gaaaataaagcaaatgaggttatggcgagtgctaaacgtgaagcagaacttctgaaaaag
gaagcagagactttcaaaaaagaagcacgttacacgcttcgtgaagaagaacaaaagcaa
cgtcgtgaaatcgaagatgaatttaagcaagaacgtaaggagttaaaggagactgaaaaa
cgcctaaaacaacgtgaagaaatcttggaccgcaaggatgataccttgacgcaaaaagaa
aaaaacttagattctaaagaggagaacctcgttagaaagactgatacgctcagtaagcgc
gaagaacaattaacgcatattgaagaaaagaaacgtctggagttggagcgtatctcaagt
ttgagcactgatgatgctcgtgatattatcctctctgaaacacgagatggtttgaccaaa
gagatggcacagattattaagagtagtgaggagaaagcacacgctgaggctgataaacgt
gctaaaaatattatctctcttgcaattcaacgtgtctcatcggattctgtggctgaacaa
acagtgtcagttgttaatttaccagatgatgggatgaagggacgaattattggtcgtgaa
ggtcgtaatattcgtacttttgaagctctgactgggattgatgtcatcattgatgataca
ccagaagcagttgtactttctggttttgacccaattcgtcgtgagattgctcggatgact
cttgaacagctcgttcaagatggtcgtatccaccctgctcgcattgaggaattggtagag
aaaaatcgcaaagcgctagatcataagatgcgtgaatatggtgagcaggcagcctttgaa
gttggtgctcacaatctccaccctgatttgatgaagattatgggacgtttacatttccgt
acatcttatgggcaaaatgtgttagatcactcggttgaggtggctcatattgctggtaat
ttggctgctgagatgggagaaaatgtagcactcgctaaacgggcaggtttcttacatgat
attggtaaggcacttgatcatgaagttgagggaagccatgttgaaatcggaacagagctt
gctcgtaagtacaaggaaaatccagtggtcatcaatgcgattgcaagtcaccacggggat
actgaccctatgagtaatattgctgtgttggtcgctgctgcggatgctttgtctgctgca
cgccctggtgctcgtcgtgagtctattgagaactatatcaagcgtttgaaagaccttgaa
gcaatctcaacaagctttgacggtgttgaaactgcctttgctttacaggcaggtcgtgag
attcgtgtaatggttaaacctgacaagctttcagatgataagatgaccgtgcttgcgcgt
gacatcaaaaatcgtattgaaaatgagatggattatcctggtaatatcaaaattactgtt
atccgtgaaactcgtgcagttgactacgctaaataa

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