Lactococcus allomyrinae: D7I46_08920
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Entry
D7I46_08920 CDS
T05686
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lact
Lactococcus allomyrinae
Pathway
lact03030
DNA replication
lact03430
Mismatch repair
lact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7I46_08920
03430 Mismatch repair
D7I46_08920
03440 Homologous recombination
D7I46_08920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lact03032
]
D7I46_08920
03400 DNA repair and recombination proteins [BR:
lact03400
]
D7I46_08920
Enzymes [BR:
lact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7I46_08920
DNA replication proteins [BR:
lact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D7I46_08920
DNA repair and recombination proteins [BR:
lact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D7I46_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AYG01210
UniProt:
A0A387BJT7
LinkDB
All DBs
Position
complement(1912868..1917775)
Genome browser
AA seq
1635 aa
AA seq
DB search
MENLFEKLMEQIKLPDRARHSSYFSHADIENVEVHTASKFWHFQLIFDEILPVSTYKMLS
ELTEAAFSNIAQTKISVSTRESDFDEQKLNDYYQYALTLPELSDSAFASVFKKYHLEQRG
VQINLLVEDNPRIDWFVKKYFPALEQRFADFGFGELKIRPVVDQKLTELSVAAHEEKVAA
RLAVQAAEQAQVNEIKKQRTEDRENKNTRETKPEFVETALSDGIAFGRKISGQSPITSMA
FIAGEGSGVIFEGVVFEAAHREFTGKESGKTNHILELKMADETSTFMISKWGRKDEEIAQ
FDQIVSQVKAMNDSVSTDENENLADSLNGALWLRVQGNIEHDKYKDDLVMTANAIIEIQS
KPTVDRVALQIKAVKSDKIQLGREIKNNEPITPMRSVSEFSTNGPVIFEGYVFKGELREI
KSRKTGNISYLLEFEMTDYTSSFYVQRWVRGDEEINLAKQIKAGLWCRVRGTVQRDNFKN
DLVLQLSDFIEIPTQNVREDKSDEKRVEFHAHTNMSQMDAIPSASSLVAQAARWGHKAIA
ITDHGGLQSFPEAHQAGKKNGVKIIYGVEANLVEDKIPIVYNEADVDMYDSTYVVFDVET
TGLSAVHNDLIQIAATKMHKGNPIDEFDEFINPGYRLSEFTTELTGITDDHLKNAKPLYD
VLTKFQKFCEGTILVAHNATFDVGFMNMNYSRNGLPIITNPVVDTLEFARNLYPEMKRFG
LGQLTKKFQIGLEHHHMANFDAEATGRLLFVFLEELRTRNTGWISLLELNDKLVSEDSYK
KVRPKHVTLYAKTQEGLKNLFKLVSYGNVRYYAGVPRIPRSVLEAHRTGLIIGSSCEVGE
VFDAITNKTFEETLEIAKFYDFIEIFPPALYRALVAGGSFKSEKELEKTLKDLIKIGKTL
GKPVLATGNLHYLNPEDAIYREIIVRSLGLGAEINWTQGHGEKAKPLPLPEAHFRTTDEM
LKDFSFLDEKTAREIVIENTQKMADEFETLTPVRDDLYTPKMVFEGGESSEERIVRLTYE
RAHEWYGNPLPDIVDARLEKELRSILGNGFSVVYIISQELVKRSNERGYIVGSRGSVGSS
LVATMIGITEVNPLAPHYRCPECQYFECFDDGTYGSGYDMPDKDCPNCGHKLIKDGHDIP
FETFLGFKGDKVPDIDLNFSGDDQPFAHLDVRDIFGEDYAFRAGTIGTVAEKTAFGFVKG
YERDYDQFYGNAEIDRLAAGSTGVKRTTGQHPGGIIVIPNYMDVYDFSPVQYPADDVNAE
WQTTHFDFHAIHDNILKLDILGHDDPTMIRKLQSLSGIVPKDIPMDDEGVMQLFSGTESL
GVTPEQLGVKLGTLGIPEMGTFTSMNMIAEAKPKTFADLLQISGLSHGTDVWAGNAQTLI
QQGIADLSSVIGCRDDIMVYLIHAGLDNSMAFSIMERVRKGMWNKMPVDERERYVEAMRA
HDVPEWYIESCSKIKYMFPKAHAAAYIMMALRVAYFKVHQPILYYCAWFSIRATAFDIGV
MGAGLEAVKAKMKEIKDKGFDATNVETNLYTTLELCNEMLERGFTFGKINLYRSEATEFV
IDGDTLIPPFVTMDGLGENVAKQIVSARKDGEFLSKMELRKRGGVSQTIIENMTNMGILG
GMPDDNQLSLFEDFF
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctttttgagaaattgatggagcaaataaaactacctgatcgtgcacgccat
tcaagttatttctctcatgctgatattgagaatgtcgaggtgcatacagcaagtaaattc
tggcactttcagcttatttttgatgaaatcttgcctgtcagtacttacaagatgttgtca
gagctgacagaggcagccttttccaatattgcccaaacaaaaatttctgtcagcacacgt
gagagtgattttgatgaacaaaagctcaatgactattatcaatacgcattgactcttcca
gaactttctgattcagcatttgcgagtgtgtttaaaaaatatcatttagaacaacgtggt
gtgcaaattaacttgcttgttgaagataatccacggattgactggtttgtcaaaaaatat
ttcccggctttagagcaaagatttgctgattttggttttggtgaattaaaaattcgtcca
gttgttgatcagaaacttacggaactgtcagtagctgctcatgaagaaaaagtagctgca
aggttggcggtacaagcagctgaacaagctcaagtcaatgagattaaaaaacagcgaaca
gaagatagagaaaataaaaatactagagaaactaagccagaattcgttgagacagcgttg
tcagatggcattgcttttgggcgaaaaattagtggacaaagcccaattacgagcatggct
tttattgctggtgaaggttcgggtgtcatttttgaaggtgttgtatttgaagcggctcat
cgtgaatttacaggtaaagagtcaggaaaaactaatcatattttagagctgaaaatggct
gacgaaacatcaacctttatgatttccaaatgggggcgtaaagatgaagaaattgctcaa
tttgaccaaattgtaagtcaagttaaagcgatgaatgattctgtcagtactgacgaaaat
gaaaaccttgctgacagcttgaatggtgcgctgtggttacgtgttcaaggaaatattgaa
catgataaatataaagatgaccttgtgatgacagcaaatgctataattgaaattcagtct
aaaccaactgtagatagagtagccctccaaatcaaagccgtaaaatctgataaaattcaa
cttggacgtgaaattaaaaacaatgagccaatcactccaatgcgctctgtcagtgaattt
tcaacgaacggaccagttatttttgagggttacgtctttaaaggagaactccgcgaaatt
aaatctcgcaaaactggcaacatcagctatcttctcgaatttgaaatgactgactataca
tccagtttttatgtccaacgttgggtacgtggagatgaagaaatcaaccttgccaagcaa
atcaaagcaggactttggtgtcgtgtacgagggacagtacaacgtgataattttaaaaac
gatttagtgcttcagctatcagatttcattgaaattccaacacaaaatgttcgtgaagac
aaatctgatgaaaagcgtgtggaatttcatgcacataccaacatgagtcagatggatgct
attccctctgcttcaagtcttgttgctcaagctgcaagatggggccataaggcgatagca
attacggaccatggtggtttacaatctttcccggaagctcatcaagcggggaagaaaaat
ggagttaaaatcatttatggtgttgaggcaaatcttgtagaagataagattccgattgtt
tataatgaagcggatgttgatatgtacgattcaacttacgttgtatttgacgtggaaaca
acaggactttcagctgttcataatgacttaattcagattgcggcaacaaaaatgcataaa
ggaaatcctattgatgaatttgatgaatttatcaatcctggatatcgtctaagtgaattt
accacagagttgacaggaattacagatgaccatctaaaaaatgcgaaaccactttatgat
gtgttaacgaagttccaaaaattctgtgaagggacaattttggttgcccacaatgccaca
tttgacgtcggttttatgaacatgaactattcaagaaatggtttgccaatcattacaaac
cctgtcgtagataccctagagtttgctagaaatttatatcctgaaatgaagcggttcggt
ttgggtcaattgactaaaaagttccaaatcggtcttgaacatcaccacatggcaaacttt
gatgcggaagctacagggcgcttgctttttgtcttcctagaagaacttcgcacgagaaat
acaggttggataagtcttttagagttgaatgataagcttgtatcggaagattcttacaaa
aaagttcgtccaaagcacgttacgctttatgccaaaacacaagaaggattgaaaaatctt
tttaaactggtcagttatggcaatgttcgttattatgcaggagtaccgagaatcccacgt
agcgtacttgaagcacatcgtacaggccttatcattggttctagctgcgaagttggtgaa
gtgtttgatgcaattacgaataaaacttttgaagaaacattggaaattgcaaaattttat
gactttattgaaatctttccaccagcgctctatagagcgttggtagctggtggatcattt
aagtctgaaaaagaactagaaaaaacactcaaagacctaatcaagattggtaagacactt
ggtaaaccagtacttgcgacaggcaatcttcattacctcaaccccgaagatgccatttat
cgtgaaatcattgtgaggagtctagggctgggagcggaaattaactggactcaaggccat
ggtgagaaagctaaaccgttaccacttcccgaagctcattttcgcacaacggatgagatg
ttaaaagattttagttttcttgatgaaaaaacagcacgtgagattgttattgaaaacact
caaaaaatggctgatgaatttgaaactttgactcctgtgcgtgatgatctttatactcct
aaaatggtttttgaaggtggagaatcttctgaagaacgtatagtacgtttgacttatgaa
cgagcacatgagtggtatggaaaccctttacctgatattgttgatgcaaggctagaaaaa
gagctgcgttcaattttggggaatggcttttcggtggtttatattatctcgcaggagttg
gtaaaacgctctaatgaacgtggttatatcgttggttcccgtggttctgtcggctctagt
ttggttgcaacgatgattggtattacagaagttaatccgcttgcgcctcactatcgttgc
ccagaatgtcaatattttgaatgttttgatgatggaacatatggttctggctatgatatg
ccagacaaggattgtccaaactgtggacacaagctcatcaaggacggacatgacattccc
tttgaaactttccttggttttaaaggggataaggttcctgatattgacttgaatttctcg
ggtgatgaccaaccttttgctcacttagatgtgcgtgatatttttggtgaagattacgca
tttcgcgcaggaaccattggtacagtcgcggaaaaaacagcttttggatttgtcaaagga
tatgagcgcgattacgatcagttttatggcaatgcagaaattgaccgattggctgctggt
tccacaggtgtcaaacgaacaacaggtcagcaccctggtgggattatcgttatcccaaat
tatatggatgtttacgattttagtcctgtgcaatatccagctgatgatgtcaacgctgaa
tggcaaacgactcactttgatttccacgcaattcatgacaacattttgaaactcgatatt
cttgggcatgatgatcctacgatgattcgtaagttacaaagtttatcgggtattgtacca
aaagatattccaatggacgatgagggagttatgcagctttttagtggtacagagtcgttg
ggggttactcctgaacaactgggtgtcaagcttggcacacttggtatcccagagatggga
acttttacctccatgaacatgattgcggaggctaaaccaaaaacttttgctgatttgcta
caaatttctggtctttctcatggtacagacgtttgggcaggaaatgctcaaaccttgatt
caacaaggtattgcggacttgtcaagcgttattggctgtcgggatgacatcatggtttat
ttgattcatgcaggattggataactcgatggcctttagcatcatggagcgcgtgcgtaaa
ggaatgtggaataaaatgcctgttgatgagcgagaacgttatgtcgaagcgatgcgtgca
cacgatgtcccagagtggtatattgagtcgtgctctaagattaaatatatgtttccgaaa
gctcatgcggcggcctatatcatgatggcactacgagtggcttattttaaagttcatcaa
cctattctttactattgtgcttggttttctattcgggcgactgcctttgatattggagtc
atgggtgcagggcttgaagcggtcaaagccaaaatgaaagaaattaaggataaaggtttt
gatgcgacaaatgttgagactaacctctatacaacgttagaactttgtaatgagatgttg
gaacgtgggtttacttttggtaagatcaacctctatcggtcagaagcaacggaatttgtg
attgatggtgatacgttaatcccaccatttgttacgatggatggtttgggagagaacgtt
gcaaaacaaattgtttcagcaagaaaagatggtgaattcttgagtaaaatggaactccgc
aagcgtggtggagtttctcaaacaattattgaaaatatgacaaatatgggtattctagga
ggaatgcctgatgataatcaactcagcctttttgaagacttcttttaa
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integrated database retrieval system
