Lacinutrix sp. WUR7: FG167_01800
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Entry
FG167_01800 CDS
T10184
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lacw Lacinutrix sp. WUR7
Pathway
lacw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lacw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FG167_01800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lacw03021
]
FG167_01800
03400 DNA repair and recombination proteins [BR:
lacw03400
]
FG167_01800
Enzymes [BR:
lacw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FG167_01800
Transcription machinery [BR:
lacw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FG167_01800
DNA repair and recombination proteins [BR:
lacw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FG167_01800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
QRM88006
UniProt:
A0A974U1M6
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All DBs
Position
complement(416759..417751)
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AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRME
GVDHEFSTIAGVVEDVTEMILNLKQMRFKRQIEDVDNESVSISISGQEQITAGDFQKFIS
GFQVLNSELVICNLDPKVNINMEITIEKGRGYVPAEENKKSSAPIGTIFTDSIYTPIKNV
KYSIENFRVEQKTDYEKLVFEIQTDGSITPQDALTEGAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcaaaaaccagacaaagtaatcatgatagattctactgatttc
gaaggtaaattcgaattcagaccactagaacctggttatggtttaaccgttggaaacgct
ttaagaagagtattactttcttctttagaaggatttgcaatcacatctgttagaatggaa
ggtgtagatcatgagttttctactatcgcaggagttgttgaagatgtaacagaaatgata
ttaaacttaaaacaaatgcgttttaagcgtcaaattgaagatgtagacaacgaatctgtt
tctatctctatttctggtcaagaacaaattacagctggtgattttcaaaaatttatttca
ggattccaagtattaaattcagaattagtaatctgtaatttagatcctaaagtaaatatc
aacatggaaattacaattgaaaaaggaagaggttatgttcctgctgaagaaaataaaaag
tcttctgcaccaataggtacaatctttactgattcaatttacacaccaataaaaaatgtt
aagtatagtattgagaattttcgtgtagaacaaaagacagattacgaaaaattagttttc
gaaatccaaacagatggttctattactcctcaagatgcattaacagaaggagcaaaaact
ttaattcaccacttcatgttattctcagatgagcgtattacattagaagcggatgaaatt
gcacaaacagaaacttatgatgaagaatctcttcacatgagacaactactaaaaactaaa
ttagtagatatggacttatctgtacgtgctcttaattgtttaaaagctgcagaagtggat
acattaggagacttagtttcttttaataaaaatgacttaatgaaattccgtaacttcggt
aaaaaatcattaacagagcttgaagagcttgtaaatgttaaaggtttgaactttggtatg
gacctttcaaaatataaactagataaagattaa
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