Lacinutrix sp. WUR7: FG167_05100
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Entry
FG167_05100 CDS
T10184
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lacw Lacinutrix sp. WUR7
Pathway
lacw03410
Base excision repair
lacw03430
Mismatch repair
lacw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lacw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FG167_05100 (recJ)
03430 Mismatch repair
FG167_05100 (recJ)
03440 Homologous recombination
FG167_05100 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacw03400
]
FG167_05100 (recJ)
DNA repair and recombination proteins [BR:
lacw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FG167_05100 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FG167_05100 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FG167_05100 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
PDDEXK_9
Motif
Other DBs
NCBI-ProteinID:
QRM88631
LinkDB
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Position
complement(1178475..1180166)
Genome browser
AA seq
563 aa
AA seq
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MRWTLKPKPEAKKLEALQKALQVDEVVAALLLQRGIETYEEAKTFFRPSLDDLHDPFLMQ
DMNKAVARIEAAFANGENILVFGDYDVDGTSSVALMSSYLKTRTANVATYIPDRYEEGYG
VSYQGIDFANDNDFSLIIALDCGVKAIDKVAYAKEKGVDFIICDHHRPGENLPEAIAVLD
PKREDCKYPYKELCGCGVGFKLIQALASKENKTVEDLTEYLDLVATAIGADIVPITGENR
VLAYFGMQVINANPRPGIQAIINQVKKTNLTITDVVFTVAPRINAAGRMKHGNYAVTLLT
EMDFDLAEKYAAEIEEFNTDRKDADRRITEEALEQIEEQKEQEGFTSVVYHETWHKGVIG
IVASRLIETYYRPTLVFTKSGDKLAASARSVSGFDVYNALEACAEHIEQFGGHKYAAGLT
LKEENYEAFKQAFEDVVSKTIDKSLLTPEIKIDRQIDLHQVDDKLMRIMRQFGPFGPGNM
TPIFVTENLKDTGYGKCVGEDDKHLRITVTQPKANKMVCIGFGLGNKLHLIEDKKPFKAV
YSVDENEWKGNVSLQLKLRDIKQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggacactcaaaccaaaaccggaagcaaaaaaactagaagctctacaaaaagca
ctgcaagtagatgaagtcgttgcagcattacttttgcaaagaggaatagaaacctacgaa
gaagcgaaaacgttttttagaccaagtttagacgatttgcatgatccattcttaatgcag
gatatgaataaggcggtggcaagaattgaagctgcttttgccaatggtgaaaatatattg
gtatttggcgattatgatgtagatggtacgtcttctgtagcattaatgtcttcctattta
aaaactagaaccgcaaatgtagcgacgtatattccagatcgttatgaagaaggttatggg
gtttcgtatcaaggaattgattttgcaaacgacaacgatttctccttaattatcgcttta
gattgtggtgtaaaagccatagataaagttgcctacgcaaaagaaaaaggtgtcgatttt
attatttgtgatcaccacagaccaggagaaaatttaccagaagccattgctgttttagat
cctaaacgagaagattgcaaatatccgtataaagaactttgtggttgtggtgttggtttt
aaactcattcaagcgctagctagcaaagaaaataaaaccgtagaagatctcaccgaatat
ctagatttggtagccactgcaattggtgcagatatagttcctattaccggagaaaataga
gtccttgcgtattttggaatgcaagttattaatgccaatccgagacccggaattcaagcc
attatcaaccaggttaaaaaaacgaatctcacgattaccgatgtcgtttttaccgttgca
ccaagaattaacgcggcgggaagaatgaagcatggtaattatgcggttactttattaacg
gaaatggattttgatttagcggaaaaatatgccgccgaaatagaagaatttaacaccgat
agaaaagatgcagatcgacgaattacagaagaagctctggagcaaattgaagaacaaaaa
gaacaggaaggttttacttctgttgtttaccatgaaacttggcacaaaggcgttattggt
attgtggcttctcgactaattgaaacctattacagaccaacgttagtgtttaccaaaagt
ggcgataaattggccgcttcggcacgatcggtgtctggttttgatgtgtacaatgccttg
gaagcttgcgcggaacacattgaacaatttggaggacataagtatgctgcaggtttaaca
ctgaaagaagaaaactacgaagcctttaaacaggcttttgaagatgttgtttctaaaacc
atagacaaatctttattaacgccagaaattaaaattgataggcagatcgatttgcatcag
gttgatgataaattaatgcgcattatgcgtcagtttggacctttcggaccaggaaatatg
acgcctatttttgttactgaaaatttaaaagataccggttacggaaaatgtgttggtgaa
gacgataagcatttacgaattaccgtaacacaaccaaaagcaaataaaatggtttgtatt
ggttttggtttaggaaataagctgcacttgattgaagataaaaaaccatttaaagcagtc
tattctgtggatgaaaatgagtggaaaggaaatgtgtcacttcagttgaagttgagagac
attaagcaataa
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