Lacinutrix sp. WUR7: FG167_12150
Help
Entry
FG167_12150 CDS
T10184
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lacw Lacinutrix sp. WUR7
Pathway
lacw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lacw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FG167_12150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lacw03019
]
FG167_12150
03009 Ribosome biogenesis [BR:
lacw03009
]
FG167_12150
Enzymes [BR:
lacw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FG167_12150
Messenger RNA biogenesis [BR:
lacw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FG167_12150
Ribosome biogenesis [BR:
lacw03009
]
Prokaryotic type
rRNA helicases
FG167_12150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QRM89949
UniProt:
A0A974U4V6
LinkDB
All DBs
Position
complement(2784403..2786274)
Genome browser
AA seq
623 aa
AA seq
DB search
MSTFQELGLNDLLLQGITDLGFEKPSEVQEKAIPILLNEETDLVALAQTGTGKTAAFGFP
MLQKIDVNSRTTQGLILSPTRELCLQIANEMKAYGKHLKGLNVVAIYGGSSITDQAREVK
RGAQIIVATPGRMKDMINRRLVDITKIQYSVLDEADEMLNMGFKEDITDILSGTPEDKNT
WLFSATMPKEVATIARKFMNEPKEITVGHKNESTNNVSHEYYLVNARDRYQALKRLADAN
PDIFSVIFCRTKRDTQKVAENLIEDGYSAGALHGDLSQNQRDIVMKQFRSRQIQMLVATD
VAARGIDVDDITHVINYQLSDEIETYTHRSGRTGRAGKTGISMVIVSKSEVRRLKSIERI
INQKFELKEIPDGMAICEVQLMSLANKIHNTEINHEIDKYLEDINGLFEETTKEELIKKF
FSVEFTRFFNYYQKSRIQKVDASRVSDRESSGGNSSDSRYFINVGEKDGFDWMKLKDFLK
EILELGRDDVFKVDVKESFSFFNTEKVHQEKIIAFFNDYKHEGRFVNVEVSENRGGGGGR
GRGGSRSGGRRDGGGDRRRGGSDKPRGERRSSGRRSEGSGENRSDRRRGSDDSSKTRSKR
SDGGDRDKSEFKTSHSRPTRSRR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagcacattccaagaattaggtcttaacgatctattattacaaggtattacagattta
ggttttgaaaaaccatcagaagtacaagaaaaagcaatcccaattttattaaacgaagaa
acagatttagttgcgttagcgcaaactggaactggtaaaacagcagcgtttggttttcct
atgttgcaaaaaatcgatgtaaacagtcgtactactcaaggtcttatcttatctcctact
cgtgagctttgtttgcaaattgcaaatgaaatgaaagcatacggaaagcatttaaaaggc
ttaaacgtagtcgctatttatggtggttctagtattacagatcaagcacgtgaggtaaaa
cgtggtgcacaaattattgttgcaacaccaggccgaatgaaagatatgattaacagaaga
ttagtagatattactaaaattcaatattcggttttagatgaagccgatgagatgttaaac
atgggttttaaagaggatattacagatattctttctggaacacctgaagataaaaatacc
tggttattttctgcaaccatgcctaaagaagtggcaactatagcaagaaaatttatgaac
gaacctaaagaaattacggttggtcataaaaatgaaagtaccaataatgtttctcacgaa
tactacttagtaaatgctcgtgacagataccaagctttaaaacgtttggcagatgcgaat
ccagatatcttttccgtaatattttgtcgtaccaaaagagatacgcaaaaagttgcagaa
aacttaattgaagatgggtatagcgcaggagctttacatggtgatttatctcaaaatcaa
cgtgatattgtgatgaaacaatttagatctcgtcaaatacaaatgcttgttgcaacagat
gttgctgctcgtggtattgatgtagatgatattacacatgtaattaactaccaattaagt
gatgaaatagaaacctatacacatagatctggacgtacaggacgtgctggtaaaactggt
atttctatggttattgtttctaaaagtgaagtacgtagattaaaaagtattgaacgtatt
attaaccaaaaatttgagttaaaagaaattcctgacggaatggctatttgcgaagtacag
ttaatgtctttagcaaacaaaatacacaatacagaaatcaatcatgagattgataagtat
ttagaagatatcaacggattatttgaagaaactaccaaagaagaacttatcaagaaattc
ttttctgtagagtttacacgtttctttaactactaccaaaaatctagaattcagaaagta
gatgcttcaagagtaagcgatcgtgaaagctctggaggtaacagctctgattctcgttac
tttattaatgtaggagaaaaggatggttttgactggatgaagttaaaagatttcttaaag
gaaatattagaacttggtagagatgatgtatttaaagtagatgtaaaagagagtttttca
ttctttaatacagaaaaagtacaccaagaaaaaataatcgcctttttcaatgattacaag
catgaaggacgttttgtaaatgtagaagtaagtgaaaatcgcggaggcggtggcggaaga
ggtcgtggcggaagtcgcagtggcggaagacgtgatggcggaggtgacagaagacgtgga
ggatcggataaaccaagaggtgaaagacgttctagcggaagacgtagtgaaggttctgga
gaaaacagaagtgatagacgtcgtggaagcgatgatagctcaaaaacacgttctaaaaga
agtgatggtggagatagagataaaagcgaatttaaaacttcgcattcacgtccaacacgc
tctagacgttaa
DBGET
integrated database retrieval system
