Lacinutrix sp. WUR7: FG167_12335
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Entry
FG167_12335 CDS
T10184
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lacw Lacinutrix sp. WUR7
Pathway
lacw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lacw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FG167_12335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lacw03019
]
FG167_12335
03400 DNA repair and recombination proteins [BR:
lacw03400
]
FG167_12335
Enzymes [BR:
lacw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FG167_12335
Messenger RNA biogenesis [BR:
lacw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FG167_12335
DNA repair and recombination proteins [BR:
lacw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FG167_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
SecA_DEAD
CH_CAMSAP2_N
DUF2620
Motif
Other DBs
NCBI-ProteinID:
QRM89982
LinkDB
All DBs
Position
complement(2832169..2834070)
Genome browser
AA seq
633 aa
AA seq
DB search
MQNAINILERYWNFTSFRPFQEDIINAVIAGEDVMALMPTGGGKSLCFQIPALAKDGICI
VVSPLVALMKDQVQTLTEKGIKAIALTSGIHYKELDALLDNCIYGNYKFLYLSPERLQQE
LVQDRIKQMNVNLIAVDEAHCISQWGNDFRPSYKNIELLRQIKPSANCIALTASATPLVV
DDIIKELDFISPKIFKQSFARPNVAYMVFHEDDKYYKMESILKKQNAPSIIYVRNRKSTV
EICNMLAKQNISATYYHGGLSNAEKDKHLNNWLQNKKQVMVATNAFGMGIDKPDVKTVIH
LNLPESIESYFQEAGRAGRNGEKAFAVILKNNSDEALVKKQFLDGLPTVDFVKVVYRKLC
NYFQISYGEGVDTTHQFNFNQFCKTYKFNTILCYNAIQFLDRTSVISLSKQFNRQTQVQF
IISNNSLFGYLKNNNHLSLVVKSILRTYGGIFDQEIKLNTTLVADKAAVNENIVLKVLAQ
LEKDEIITLNTSKTDAEITFLEPREDDKTINVIANILKQQNALKQKQVAAILSYVKKEDL
CKSIQLLSYFGEKDLKPCGICSVCITQKKPEVTDTKKIKNAIISLLENGDLSSRAILQEL
PFSEKEMNNMIQLLLEHHIIMITKTNTYKLAHL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgcaataaacatattagaacgttattggaactttacaagttttagacctttt
caagaagacatcataaatgcggtaatagcaggagaagatgttatggcattaatgccaact
ggaggaggtaaatctttatgttttcaaattcctgcacttgctaaagacggtatttgtatt
gtagtttcccctttggttgccttaatgaaagaccaagtacaaacgcttaccgaaaaaggt
attaaagctattgcgcttactagcggaatacattataaagaactagacgcccttttagac
aattgtatttatggtaattataagtttctatatctatcgccagaacgtttacaacaagaa
ctagttcaagaccgaataaaacaaatgaatgtaaaccttattgctgtagatgaagcacat
tgcatttcacaatggggaaatgattttagaccatcttacaaaaacatagaattactaagg
caaataaaaccaagcgctaattgtattgcacttaccgcatctgcaactcctttagtagta
gatgatattataaaagaactcgattttattagtcctaaaatatttaaacaatcttttgct
agaccaaatgtagcttatatggtttttcatgaagatgataaatattataaaatggaaagc
attttaaaaaaacaaaatgcaccttccattatttatgttagaaatagaaaatctactgta
gagatttgtaatatgttggccaaacaaaacataagcgcaacgtattatcatggcggactt
agtaatgccgaaaaagacaagcacctcaacaactggttacaaaacaaaaaacaagtaatg
gttgctaccaatgcatttggaatgggaattgataaaccagatgtaaaaactgttattcat
ctaaacctacccgaaagtatagaaagctattttcaagaagccggtcgtgcaggaagaaat
ggtgaaaaagcttttgctgtaattttaaaaaataatagcgatgaagctttagttaaaaaa
cagtttctagatggattacctaccgtagactttgtaaaagtggtatacagaaagctctgt
aattactttcaaatatcttatggagaaggtgtggataccacacatcaatttaattttaat
caattttgtaaaacctataaattcaacaccattttatgctataatgctattcagttttta
gatagaacaagtgtcattagtttatcgaaacagtttaataggcaaacgcaggtgcaattt
ataattagtaacaatagtttgtttggctatttaaaaaacaacaaccatttaagtcttgtg
gtaaaatccattttaagaacttatggtggcatttttgatcaagaaataaaattaaacacc
acattagtagcagataaagctgcggtgaatgaaaacattgtattaaaggttttagcgcaa
ttagaaaaagatgaaataattacactaaatacttctaaaaccgatgctgaaattactttt
cttgaacctagagaagacgataaaaccattaatgtaattgcaaatattttaaaacaacaa
aatgcattaaagcaaaaacaagtagctgctattttaagctatgttaaaaaggaagatctt
tgtaaaagcatacaactactctcctattttggggagaaagatttaaaaccttgtggtatt
tgctcggtctgtattacacagaaaaaaccagaagtaacagacacaaagaaaattaaaaac
gctattattagcttattggaaaacggcgatttatcctcaagagcgattttacaagaattg
cccttttctgaaaaagaaatgaataatatgattcaattattattagagcatcatattatt
atgattacaaaaacaaacacctacaaattagcacatttataa
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