Lachnoclostridium sp. YL32: A4V08_01710
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Entry
A4V08_01710 CDS
T04430
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lacy03032
]
A4V08_01710
03400 DNA repair and recombination proteins [BR:
lacy03400
]
A4V08_01710
Enzymes [BR:
lacy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A4V08_01710
DNA replication proteins [BR:
lacy03032
]
Prokaryotic type
DNA Topoisomerases
A4V08_01710
DNA repair and recombination proteins [BR:
lacy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4V08_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ANU44726
LinkDB
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Position
complement(509471..511390)
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AA seq
639 aa
AA seq
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MAKEQYNADSITVLEGLEAVRKRPGMYIGGVGTKGLNHLIYEIIDNAVDEHLAGFCSSVW
VTLEADGSCTVRDNGRGIPVGLHKKGISAARIVLSTLHAGGKFDNDAYKTSGGLHGVGSS
VVNALSAHMELKVYRDGFIYHDEYEKGRPVIKLENGLLPVIGKTRETGTCINFLPDGDIF
EKTRFKADWLKSRLHETAYLNPNLTLYYENKRPGEGEKVAFHEPEGIVAYVRELNSGKTP
VHDPIYFKGTVDKVEVEAAIQFVDTFEENILGFCNNIFTQEGGTHLAGFKTKFTALINSY
AREIGILKDKDTNFTGADTRNGMTAVIAVKHPDPIFEGQTKTKLASADATKAVFTVTGDE
LQLYFDRNVEVLKGVIGCAEKSAKIRRAEEKAKTNMLTKSKFSFDSNGKLANCESRDASR
CEIFIVEGDSAGGSAKTARNRQYQAILPIRGKILNVEKASMDKVLANAEIKTMINSFGCG
FSEGYGNDFDITKLRYDKIILMTDADVDGSHIDTLLLTFLYRFMPELIYDGHVYIAMPPL
FKVIPKRGEEQYLYDEKELERYRKTHTGDFTLQRYKGLGEMDAQQLWETTLDPARRVLKR
VEIEDARMATEITGMLMGTEVGPRRQFIYEHADEAEIDA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaacaatataatgcggacagtattacggtgctggaaggactggaggcggtc
cgtaagcgtcctggtatgtatataggaggtgtgggaaccaaggggttaaaccatctgatt
tatgaaatcattgataatgcggtggatgagcacctggccggattctgcagcagtgtgtgg
gtgactttggaagcagacggctcctgtacggtccgtgataacggccgcggaatcccggtc
ggacttcacaaaaagggcatatcagccgccagaatcgtactgtccacccttcatgcgggc
ggtaaattcgataacgacgcttataagaccagcggaggacttcacggtgtgggttcctcc
gtagttaatgccctgtcagcccatatggaacttaaggtttacagggacggcttcatctat
cacgatgaatatgaaaaaggacgtcctgtcatcaagctggagaacggacttctccctgtg
attggaaagacgcgggagaccggtacctgtatcaatttcctgcctgacggcgatatattt
gagaaaacacgtttcaaggcggactggctcaagagccgtctgcacgagaccgcatactta
aacccaaacctgaccctttactatgagaacaagcggcccggagagggggagaaggtggcc
ttccatgagccggagggcattgttgcctatgtgcgggagctgaattccggcaagacgccg
gtacacgaccccatttatttcaaggggaccgtggacaaggtagaggtggaggccgccatc
cagttcgtggacacatttgaggagaatatactgggcttctgcaacaacatctttacccag
gagggcggcacccacctggctggcttcaagaccaaattcacggcgctgattaacagctat
gccagggagattggaattttaaaggataaggataccaactttacgggagccgataccagg
aacggcatgacggccgtcatcgcggtaaagcatcccgaccctatcttcgaggggcagacc
aagacaaagctggccagcgccgacgccaccaaggccgtgtttacggtgaccggggacgag
ctgcagctttactttgaccgcaacgtggaggtgttaaagggagtcattggctgtgcggaa
aaatcggccaagattcgccgggccgaggaaaaggccaagaccaacatgctgaccaaatcc
aaattttcctttgacagcaacggtaagctggcaaactgcgagagccgggatgcctccagg
tgtgagatattcattgtggagggagattccgccggcggctctgccaagactgccaggaac
cgccagtaccaggctatcctgcccatcaggggaaaaatcctcaacgttgagaaggcgtcc
atggataaggtcctggccaatgcggaaatcaaaaccatgatcaatagctttggctgcggt
ttttcagaaggatacggcaatgactttgacatcacaaagctgcgctatgacaaaatcatc
ctgatgactgatgccgatgtggacggcagccacatcgacaccctgcttctcaccttcctt
taccgttttatgccggaactgatttatgacggtcatgtgtatatcgcaatgccgcctctg
tttaaggtgatccctaagcggggggaggaacagtatctttacgatgaaaaggagctggag
cgttacaggaaaacacataccggcgactttacgctgcagcgctacaaaggtctgggtgag
atggacgcacaacagctgtgggagaccactctggacccggcgcgccgggttctcaagcgg
gtggagatagaggacgccagaatggctacggagataaccggaatgctcatgggcacagag
gtgggaccgcgccgccagttcatttatgagcacgcggacgaggcggagattgacgcatag
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