Lachnoclostridium sp. YL32: A4V08_05865
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Entry
A4V08_05865 CDS
T04430
Name
(GenBank) hypothetical protein
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lacy03000
]
A4V08_05865
Transcription factors [BR:
lacy03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
A4V08_05865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_24
FilR1_N
MarR_2
MarR
HTH_PafC
HTH_AsnC-type
HTH_Crp_2
HVO_A0114
HVO_A0261_N
GntR
Put_DNA-bind_N
HTH_5
HTH_20
DUF977
HTH_29
HTH_IclR
WHD_RNase_R
DUF4423
FaeA
DUF8612
HemN_C
TrmB
HTH_36
Rrf2
HTH_Mga
DUF294_C
WHD_RecQ_mid_bact
Fe_dep_repress
FeoC
TGS
RNase_R_N
DUF4986
Motif
Other DBs
NCBI-ProteinID:
ANU45423
LinkDB
All DBs
Position
complement(1404608..1405426)
Genome browser
AA seq
272 aa
AA seq
DB search
MLAEQRYQKIISLMQTDGSVRVADLKKKMGVSPETVRRDLENMEALGLIRRTRGGAFLAD
RENMPGEQNIQYQNFSARERENLESKVEIAEFAVRFIKEGQSIALDSGTTAYELARAIKR
TFRSLTVVTNSIAILNELADAKGITLIATGGVYRPEELAFVSDIAGMIFSKLSINLFFLT
TCGISVDRGITYQRMDEIIVQEKMMEASDQTIVIADSTKLGVNSLVKMCDIDRVGMIITD
SEAAKEQIQPFEQAGIRVEKPEKQGDKGHGAK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagaacaacggtatcaaaagataataagcctgatgcagacagacggaagcgtc
agggtcgcggatttaaaaaagaagatgggagtctctcctgaaacagtccgcagggacctg
gagaacatggaagcccttggactgatacgccgtacaaggggaggggcttttctggcggat
agggaaaatatgcctggggagcagaacatccaataccagaatttttcagccagggaaagg
gaaaacctggagagcaaggtggagattgcagaatttgcggtccgttttattaaggagggt
cagtccatagccctggactccggaaccactgcctatgagctggcccgtgccataaagagg
acattccgttcactgaccgtggtcaccaattccattgctattttaaatgaactggctgat
gcaaagggaatcacactcattgcaacgggcggcgtataccgccctgaggagctggccttt
gtgtctgatattgcaggcatgatattttccaaattaagcatcaacttattttttctgacc
acctgcggcatttcggttgaccggggaatcacctaccagcgtatggatgaaatcattgtg
caggaaaagatgatggaggcctcagaccagaccattgtcattgcggacagtaccaagctg
ggcgtgaattcactggtgaagatgtgcgacatcgaccgggtggggatgattattacggat
tccgaggcagcaaaggagcagatacagccctttgaacaggcaggcatcagggtcgagaaa
ccggaaaaacagggggataaaggtcatggagcaaaataa
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