Lachnoclostridium sp. YL32: A4V08_06710
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Entry
A4V08_06710 CDS
T04430
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lacy03016
]
A4V08_06710
Enzymes [BR:
lacy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
A4V08_06710
Transfer RNA biogenesis [BR:
lacy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4V08_06710
Prokaryotic type
A4V08_06710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ANU45559
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All DBs
Position
complement(1562524..1563270)
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AA seq
248 aa
AA seq
DB search
MNIGVWLSYDGTRYDGWQKQGNTDRTIQGKLEAVLEKLEGSPVEVHGSGRTDAGVHAEGQ
VANFHLVKRMGPDKILDYMNRYLPEDIAVTRACVMPERFHSRLNAVKKTYRYQIETASKK
NVFERHYYYGLGQKLDVEKMEQAAAILTGTHDYKSFCGNKKMKKPTVRTIESICFEQMGS
RIHISFTGNGFLQQMVRILSGTLIEVGVGKRKPEEMARVLEARERSVAGFTAPPEGLFLE
NVEYGDLI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaatataggagtgtggctgtcctatgacggcaccagatacgacggctggcagaagcag
ggaaatacagacaggaccatccagggcaagctggaggcggttctggaaaagctggaaggc
agtccggtggaggtccacggttcaggccggacagatgcaggtgtccacgcagaaggccag
gtagctaacttccatctggtgaagaggatgggaccggataagattctggattatatgaac
cggtacctgccggaggatattgccgttacaagggcatgcgtgatgccggagcggtttcac
agccggttgaacgcggtgaaaaaaacataccgctaccagatagagacagcttcaaaaaag
aatgtgtttgagcgccattattattatggcttagggcagaaactggatgtggagaagatg
gaacaggcagcggcaatcctcacgggaacccatgattataaaagcttctgcggcaataag
aaaatgaagaaaccaacagtccgcaccattgaatccatctgctttgaacagatgggaagc
agaatccatatatcctttacgggcaatggtttcttgcagcagatggtacggattttatca
ggcacccttatagaggtgggagtgggcaagcgaaagccggaggaaatggcccgcgtcctg
gaggccagggaacgctctgtggctggttttaccgccccgcctgaagggttattcctggaa
aatgtggagtatggtgatttgatatga
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