Lachnoclostridium sp. YL32: A4V08_06815
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Entry
A4V08_06815 CDS
T04430
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V08_06815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lacy03019
]
A4V08_06815
03016 Transfer RNA biogenesis [BR:
lacy03016
]
A4V08_06815
Enzymes [BR:
lacy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4V08_06815
Messenger RNA biogenesis [BR:
lacy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4V08_06815
Transfer RNA biogenesis [BR:
lacy03016
]
Prokaryotic type
tRNA degradation factors
A4V08_06815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
DUF1654
KH_NusA_1st
KH_Mug60-KHD4
KH_N4BP1_2nd
NDUF_B7
KH_2
Motif
Other DBs
NCBI-ProteinID:
ANU45572
LinkDB
All DBs
Position
complement(1585315..1587438)
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AA seq
707 aa
AA seq
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MFKSFSMDLAGRKLTVEVGRVAAQASGAAFMHYGDTVVLSTATASSKPREGIDFFPLSVE
YEEKLYSVGKIPGGFNKREGKASENAVLTCRVIDRPMRPLFPKDYRNDVTLDNIVMCVDP
DCSPELTAMLGSAIATSISDIPFAGPCAATQVGLIDGQFIINPTADQKQVSDMALTVAST
REKVIMIEAGANEVPEQIMIDAIFKAHEVNQEIIRFIDTIVAECGKEKHSYESCAVPEEL
FAAIREIVTPQEMEEAVFTDDKQTREKNIAEITAKLEEAFAGNEEWLAVLGEAVYQYQKK
TVRKMILKDHKRPDGRAITEIRHLAAEVDLLPRVHGSGMFTRGQTQILNVCTLAPLSEAQ
KLDGLDENETSKRYMHHYNFPSFSVGETKPSRGPGRREIGHGALAERALIPVLPSAEEFP
YAIRTVSETMESNGSTSQASICASTLSLMAAGVPIKEMVAGISCGLVTGDTDDDYLVLTD
IQGLEDFFGDMDFKVGGTKNGITAIQMDIKIHGLTRPIIEEAIARTREARMYILDNVMRP
VISEPRKHLSPYAPKIKQITIDPQKIGDVVGKQGKVINKIIEETGVKIDITDDGSVNVCG
TDEAMIDRAIQIITGIVTDIEAGMVFNGKVVRIMNFGAFVELAPNKDGMIHISKLSDKRV
GKVEDVVNIGDEVTVKVTEVDKMGRINLTMRPSDLAENKTAARTEEK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagttttagtatggatttggcaggacgcaaactgaccgttgaggttggccgt
gtggctgcccaggcaagcggtgcggccttcatgcactatggcgatacggtggtgctttcc
acggcaaccgcgtcgtccaagccaagggagggcattgatttcttccctctcagcgtggaa
tatgaggaaaaattatactcagtaggaaagattccgggcggtttcaataagagagagggc
aaggcttctgaaaatgctgtcctgacctgccgcgttatcgaccgtcccatgcgtccgctg
ttccccaaggattaccgcaacgacgtgaccctggacaacatcgtaatgtgcgtggatcct
gactgcagccctgagctgacagccatgctgggttctgctattgcgaccagcatttccgat
atcccgtttgctggtccctgtgctgccacacaggtgggtctgattgacggccagttcatc
atcaaccccactgctgaccaaaagcaggtgtctgatatggctctgaccgtggcttccacc
agggaaaaggttatcatgattgaggccggcgccaacgaggttccggagcagattatgatt
gacgccatctttaaggctcatgaagtgaaccaggaaattatcaggttcatcgacaccatc
gtggctgagtgcggcaaggaaaagcactcttatgagagctgcgcggtgccggaagagctg
tttgcagccatcagggaaatcgtgaccccacaggaaatggaagaggccgtgtttaccgat
gacaagcagacccgcgagaagaatatagcggaaatcacagcaaagctggaagaggcattt
gccggaaacgaagaatggcttgccgttctgggcgaggctgtttaccagtatcagaagaag
acggtccgtaagatgattttaaaagatcacaagcgtcctgacggccgcgctatcacggaa
atccgtcacctggccgcggaagttgaccttcttcccagagttcacggctcaggcatgttt
acccgcggccagacacagattctcaacgtctgcaccctggctcctctgtccgaggcccag
aaattagacggcctggatgaaaatgagaccagcaagcgttatatgcaccactataacttc
ccgtccttctctgtaggcgagacaaagccaagcagaggaccgggccgccgcgagataggc
catggggccctggcggagagggcgttgattccggtccttccaagtgcggaggaattccca
tatgcaatccgtaccgtatctgagaccatggagtccaatggttccacctctcaggcaagt
atctgtgcgtccaccctttcgctgatggctgccggtgtgcctattaaggagatggtagcc
ggtatttcctgcggtcttgtgaccggtgatacggatgacgattatctggtgcttaccgac
attcagggcctggaagatttttttggcgatatggactttaaggtgggcggaaccaagaat
ggtattactgccattcagatggatattaagattcacggactgacacggccgattattgag
gaagccattgccaggacaagggaagccagaatgtatattctggacaatgtaatgagacct
gttatctcagagccgagaaagcacttaagcccatatgctccgaagattaagcagattacc
attgatccgcagaagattggcgacgtggtaggtaagcagggcaaggtcatcaacaagatt
attgaggagaccggcgttaagatagacattacggacgacggttctgtgaatgtatgcggc
acggacgaggccatgattgacagggctatccagattattaccggaatcgtcacggatatt
gaggcgggcatggtgtttaacggcaaggtagtgcgtatcatgaactttggcgcatttgtg
gagctggcccccaataaggatggtatgattcatatttccaagctgtctgataagcgcgtt
ggcaaggtggaggatgttgtgaacatcggagatgaggttactgtaaaggtaactgaggtc
gataagatgggcagaatcaacctgaccatgagaccgagcgacttggcagagaataagacc
gctgccaggacagaggaaaaataa
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