Lachnoclostridium sp. YL32: A4V08_06835
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Entry
A4V08_06835 CDS
T04430
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lacy03016
]
A4V08_06835
Enzymes [BR:
lacy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A4V08_06835
Transfer RNA biogenesis [BR:
lacy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4V08_06835
Prokaryotic type
A4V08_06835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANU50378
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All DBs
Position
complement(1589126..1590052)
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AA seq
308 aa
AA seq
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MYHGIINVYKEPGYTSHDVVARLRGILKQKKIGHTGTLDPAAEGVLPVCLGTGTRLCDML
TDRSKTYQAVMLLGCETDTQDTTGTILAENREGALSLTGEQVRDAVMGFRGNYAQIPPMY
SALKVDGKKLYELARAGKEVERQPRPVQILDIKVNGIDLPRVWMEVTCSKGTYIRTLCHD
IGRLLGCGGCMDHLTRTRVDRFSVEDSLTLDQLEQLRDQGELESCILPVEEALQSFRPLR
CLPEADSLLHNGNPCFARQLDWSRSGEREAGAEDGQMFRMYDSNHRFTGVYQYQKDRHWW
KPWKMFPM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacggaatcataaatgtatacaaagagccgggctatacttcccacgatgtggta
gcccggcttcgagggattttaaaacagaaaaaaataggccatacaggaaccctggaccca
gcggctgaaggagtccttcctgtttgtctggggacgggcaccaggctgtgcgacatgctg
acggaccggtccaagacataccaggccgttatgctgctgggctgtgagacagacacccag
gacaccacaggaaccattctggcagaaaacagggaaggggcactgtcccttaccggggaa
caggtaagggacgctgtcatgggatttaggggcaattacgcccagatacctcccatgtac
tccgcccttaaggtggacggaaagaagctgtacgagctggcaagggcgggtaaggaagtg
gaacgccagccaaggccggtgcagattctggacataaaggtaaacgggatagatctgccc
agggtttggatggaggtcacctgttccaagggaacatacatacgtaccctgtgccatgat
atcggaaggcttttgggatgcggcggctgtatggatcaccttacacgtaccagggtggac
cgcttcagcgttgaggacagcctgacactggaccagctggaacagctccgtgaccaggga
gaactggagagctgcatcctcccggtggaggaggccctgcagtccttccggcctcttaga
tgcctgccggaagcagactccctcttgcacaatggcaatccctgctttgcaaggcagctg
gactggagccggtcaggtgagcgggaggccggggctgaggacggacagatgttccgcatg
tatgacagcaatcacagatttacgggggtctaccagtaccagaaggacaggcactggtgg
aagccctggaagatgttccccatgtag
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