KEGG   Lachnoclostridium sp. YL32: A4V08_08310
Entry
A4V08_08310       CDS       T04430                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
lacy  Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:lacy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lacy02048]
    A4V08_08310
Enzymes [BR:lacy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4V08_08310
Prokaryotic defense system [BR:lacy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    A4V08_08310
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII HD Helicase_C Cas3_HD AAA_22 Tgi2PP
Other DBs
NCBI-ProteinID: ANU45809
LinkDB
Position
complement(1878339..1880531)
AA seq 730 aa
METYLAHSAKNGYSPQSYAKHVENTKKWSLIFAKEMKGYCRKDAEQIENILYLAAPYHDL
GKLDKENQKVLHKEGVKSEHLPVNHMDAGAAFLKQKGQEALCSLALVYAHHRGLPDFTVE
MNRAETVCYRDARESVRACFDRELEQLLQLHRQLIPERTVHNPEYCEGDMSMFFRMVFSC
LVDADHSDTATVYGQYPKRDNMPKLQPELRLKALNCYVASLGEEKTNKRNELRTEMYEKC
RDGQRETGIVSNDGPVGSGKTTAVMAYQLNQAILKGARRIFVVLPYTNIITQSVEVYRKA
LKLPGEDPEAVVAELHCKADFEDEDTRYLTSLWRAPIIVTTAVAFFETLASNRPGALRRL
HELPGSVIFVDEAHAALPLKLLPLAWHWMKVLEKEWSCYWILASGSLVRFWQIPELVGIE
KKQVPEMVPRNLRSELLGYEKNRIKFCWNPRPFSRGELIDWVMAKPGPRLVIMNTVQSAA
VIAVDICKKYGRECVEHLSTALMPEDRAETIEVVKRRLANSGDTNWVLVATSCVEAGMDF
SFRIGFRELASVLSLLQAAGRVDRNGFYKDAEMWSISMQDDTMLTQNPGVKISAELLEEY
LRDGIEITPELSTKSIRDELQRGKIEKKDMQELIEAEAIQNFKTVNDRFHVMENDAIPVI
IKADVAEQIKQGRGNWKEVQKYSVSIRRTNLEKWQVKQIAKDVYQWTLPYNSFLGYMAGV
LRQAELMNKM
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggaaacgtatcttgctcacagtgcgaaaaacggatattcccctcagagctatgcaaaa
catgtggagaatacaaaaaaatggtctttgatatttgcgaaagagatgaaagggtactgt
aggaaggatgcagaacagattgagaatatcttgtacttggcagcaccataccacgatttg
ggaaagctggataaggagaatcagaaggtattgcataaggaaggtgtaaaatcagaacat
ttacctgtgaaccatatggatgccggtgcggcatttcttaaacagaaagggcaggaagca
ctatgctcacttgcgttggtgtatgcgcatcatcgggggctgcctgactttacagtggaa
atgaacagggcagagacggtatgctatcgggatgcacgtgaatcagtaagagcctgtttt
gaccgggagctggagcagctgcttcagctccacaggcagctgattccggaaagaaccgta
cataatccggagtattgtgaaggtgatatgtccatgttcttccgaatggtgttttcatgt
ctggtggatgcggaccattcggatacagcaactgtttatggacagtatcctaaacgggat
aatatgccgaaacttcagccggagcttcgcctgaaggcgctaaattgttatgtagcaagt
ctgggagaggaaaaaacgaataaacgaaatgaattgcgtacagagatgtatgagaagtgt
cgggatggtcagcgggaaacagggattgtttctaatgacggtccagttggttcaggaaaa
accacggcagtgatggcgtatcagttgaatcaggctatcttaaagggagccaggcgcatt
tttgtggtgcttccatacacaaatattatcacacagtcagtggaagtttaccgaaaagct
ctgaaattgccgggagaagatccggaggcggtcgtagcagaattgcattgcaaggcggat
tttgaagatgaggatacgcgttatctgacatccctgtggagagcaccaattatagtcact
acggcagtcgcattttttgaaacactagcctcaaaccgtccaggggcactccgccgcctg
catgaattgccggggagcgttatttttgtggatgaggcgcatgcagctctgccactgaaa
ctgcttccacttgcgtggcattggatgaaagtattggaaaaggagtggagctgttattgg
attttggcgtcaggctcactggtccgtttttggcagattccggagttagttggaatagag
aaaaagcaggtcccggagatggttcccagaaacctgcgcagcgaattgctagggtatgag
aaaaatagaattaaattttgctggaatccgcgtccatttagccggggagaattgattgac
tgggttatggcaaagcctggtcctcgtcttgtaattatgaataccgtgcaaagtgcggct
gtgattgcggttgacatttgtaaaaaatatggaagagaatgtgtggaacatctctccact
gcacttatgccggaggaccgcgcggaaacaattgaggtagttaagagacgattggcaaat
tcgggggatacaaactgggttttagtagcaacatcatgtgtggaagccggcatggatttt
tcattccgaattggattcagagaactggcttctgttctgtcactgctgcaggcagcgggc
agagttgaccgaaacggattttacaaagatgcagaaatgtggagtatcagcatgcaggat
gatacaatgttgactcagaatccgggagtgaaaataagtgcagaacttctggaagaatat
ttacgagatggaatagaaattacaccggaattgagcacaaaatcaatcagagatgaactg
caaagaggaaagattgaaaaaaaagatatgcaggagttaatagaggccgaggcaattcag
aattttaaaacggtgaatgaccggttccatgtaatggaaaatgatgccataccggtgatt
attaaagccgatgtggcagaacagattaaacaggggcgcggaaactggaaggaagtgcag
aaatattctgtatccatacgccgaacgaatttggaaaagtggcaagtaaaacagattgca
aaggatgtttatcagtggacactcccttataactcttttctgggttatatggctggagta
ctaaggcaagcggaattaatgaataaaatgtag

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