Lachnoclostridium sp. YL32: A4V08_09910
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Entry
A4V08_09910 CDS
T04430
Name
(GenBank) peptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4V08_09910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lacy02000
]
A4V08_09910
Transporters [BR:
lacy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A4V08_09910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MTPAP-like_central
Motif
Other DBs
NCBI-ProteinID:
ANU46072
LinkDB
All DBs
Position
complement(2211452..2213056)
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AA seq
534 aa
AA seq
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MRKTWKKVIALSLVAAMAVSAAGCSKSGQTSTEGGSAQTQAGSKETEAGGSTGGSGEYKD
TVVWAQGADVTSLDPHQGKETPAVEVTDQIFDTLTVVDAATGELQPLIAESWDQNSDTSY
TFHIRQGVKFHDGSEVKAEDVKFSLDRAINSAAVSYIVDFIDRVDVVDDYTVNVELKAPY
APALRNLSVPFAAIVPKAVVEADEEAFKLHPIGTGPYKFVEWKQGDSVTLERFDDYYAGP
AETQKLVMKVIPEASQRTIALETGEVDLAYDLLPNDLEKVRSNSELQLFEAPSLTCYYIS
MNMNKAPYDDQKVRDAVNYAIDRQLIIDTIASGSGEPADAIIAPAVFGYFSPGAYEYDPE
KAKSLLAEAGYPNGFETSIWVNDNQTRVEICQAVQAMLQDVGITCNIEVMEFGSFISRTS
AGEHDMGYFGWVTSTTDADYTYYSLEHSSQQGAAGNRSFIADPEVDKLIETGRTSADESV
RLKAYEDLAVKLKEVNNNAPIYYSTITAGAGAKVEGFVMDPIGYHKLDHVKVAK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacatggaagaaagtcattgcattatccttagtggcagcaatggcagtaagt
gcagccggttgttccaagtccggacagacctccacggaaggcggcagcgctcagacacag
gcaggttccaaggaaacagaggcaggaggaagcaccggcggttccggggagtacaaggac
acggtggtatgggcacagggagctgatgttacttccttagacccgcatcagggcaaggag
acgccggccgtagaggtaacggatcagattttcgacacgctgaccgttgttgacgctgct
accggagagctgcagcccctgattgcggagagctgggatcagaattccgatacatcctat
acattccacatccgccagggcgtaaaattccacgacggttccgaggtgaaggcagaggac
gtaaagttctccctggacagagccattaattccgctgcggtttcctacattgttgacttt
atcgacagggtggacgtggtagatgattatacggtcaatgtagagctgaaggcgccttac
gcaccggctctcagaaatctttccgtaccgtttgcagccattgttccaaaggcagtggtg
gaagcggacgaggaagccttcaagcttcatccaatcggcacaggcccatataagttcgta
gagtggaagcagggggattccgttacactggagcgctttgacgattactatgcaggaccg
gcagagacacagaagctggttatgaaggtgattcctgaggcatcccagagaaccatcgcc
ctggagaccggagaagtggacttggcctacgacctgcttcccaacgacctggagaaggta
aggagcaattccgagcttcagctgttcgaggctccgtccctgacctgctactacatttcc
atgaacatgaacaaagcgccctatgatgaccagaaggtaagggatgccgttaactacgcc
attgaccgccagctgattatcgacaccattgccagcggatccggagagccggctgacgcc
atcatcgcaccggctgtattcggatacttcagcccgggcgcttatgagtatgaccctgag
aaggcaaaatcccttctggccgaggccggatatccaaacggattcgagaccagcatctgg
gtaaatgacaaccagacacgtgtagagatatgccaggctgtacaggccatgcttcaggat
gtgggaatcacctgcaacatcgaggtaatggaattcggcagcttcatttccaggacttcc
gcaggcgagcatgacatggggtactttggctgggtgacatccaccacagacgcggactac
acctactattcactggaacactcctcacagcagggagcagccggaaaccgcagcttcatc
gcagaccctgaggtagacaagctcattgagacaggaagaaccagcgcggacgagtccgtg
agactgaaggcatatgaggacctggctgtgaagttaaaagaagtaaacaacaacgcacct
atttactacagcaccatcaccgcaggcgcaggcgccaaggtggaaggtttcgtgatggat
ccaatcggctaccacaagctggatcatgtaaaggttgcaaaataa
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