Lachnoclostridium sp. YL32: A4V08_11050
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Entry
A4V08_11050 CDS
T04430
Name
(GenBank) ABC transporter
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A4V08_11050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lacy02000
]
A4V08_11050
Transporters [BR:
lacy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
A4V08_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_22
AAA
AAA_30
nSTAND3
ABC_ATPase
SbcC_Walker_B
AAA_16
AAA_25
AAA_18
AAA_29
AAA_24
AAA_19
NACHT
SRP54
RsgA_GTPase
NTPase_1
nSTAND1
AAA_15
AAA_14
NPHP3_N
Zeta_toxin
ATP_bind_1
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ANU46254
LinkDB
All DBs
Position
2462711..2464408
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AA seq
565 aa
AA seq
DB search
MYSICISVQDQIGIVCNILKSFFQSFMMFSVFLIMLNLDTLTASLILKAVVVILISILGR
FFFQWMSDRIMSGTGYDIFRDYRLEIGERLKQAPMGYFSEQNLGTIQTILTTTIADLEGY
SMMAIEQMTSGVAMAFLMSVMMFFFNPIIGTLSMIGLVIGLIVLRLVRQRAAEYSPVYQA
AQENLVNKCLEYIRGIAVLRSFSNGKSGQKEVRMAFQKKWDADYLQEKATAGVLRLYGLV
YKLMSCVLIAAAGILYMDGRISLPNCMTFLFCAFTVYSDLETMGNSAFLSKKINTELDRL
EEVTNIPKMDTITDKLNPANYEISLKDVSFGYGSRKIIENISLNIPEHTTCAIVGPSGSG
KTTLCSLIARFWDVQEGSVCIGGQNVKNYTADSVLDCISMVFQKVYLFHDTIENNIKFGK
PKATLDEVMEAAKRACCHDFIMALPDGYQTVIGESGSTLSGGEKQRISIARAILKDAPIV
ILDEATSSVDPENEQALLSAIEELTKNKTLISIAHRLSTVQKADQIIVIDNGQIRQKGTH
KQLSQEDGIYRNFLKLRVEATGWQL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatttgtatatcagttcaggatcagattggtatagtatgcaatatattaaag
tcctttttccaaagttttatgatgtttagtgtattcttaatcatgttaaaccttgataca
cttactgcctctctaattttgaaagccgtagttgtcatccttatcagtattcttggccgc
ttcttcttccaatggatgagtgaccggataatgagcggaactggttatgatattttccgc
gattatcgtttagaaattggagagcggttaaaacaagctcccatgggttatttttcagag
cagaatcttggaaccatccagacaattttaacaaccaccatagcagatttggaaggttac
tccatgatggcaatcgaacaaatgaccagcggcgttgctatggcattccttatgtccgtt
atgatgttctttttcaatccaataataggaacgttaagtatgataggcttagttattggc
ctgatagtgctgcggctggtcagacagcgggccgcagaatattcacccgtttaccaagct
gcccaggaaaatttggtaaataaatgtttagagtacatacgaggaattgctgttctccgg
tcattttcaaatggcaaaagtggccagaaagaagtgcgtatggcatttcaaaagaaatgg
gatgctgattatttacaagaaaaagcgactgcgggtgttctccggttatacggcttggtt
tacaaattgatgagctgtgtcttaattgcagctgcaggtatcttatatatggatggaagg
atttcccttccaaactgcatgacatttttgttttgtgcatttaccgtttactccgacctg
gaaaccatgggtaacagcgcatttttgagtaaaaaaataaataccgaattagaccgttta
gaagaggttacaaatatccccaaaatggataccattacagataaactgaatcctgccaat
tatgagatttctttaaaagatgtatcgtttggctatggttcccgcaaaattattgaaaac
atttctttaaacataccagagcatactacatgtgcgattgtaggtccgtcaggaagcgga
aaaacgacactatgcagcctaatcgcccgtttctgggatgttcaggaaggttctgtttgc
attggtggacaaaatgtgaaaaattatactgctgacagtgtgcttgactgtattagtatg
gtctttcagaaagtttatctattccatgacacaatagaaaataatattaaattcggtaag
cccaaagcaacacttgatgaagtaatggaagcagctaaaagagcttgctgccacgacttc
attatggctttgcctgatggatatcagaccgtgattggcgaaagtggatctacattatct
ggcggtgagaaacagagaatttctattgcccgggcaattttaaaagacgcacccattgtc
attttagatgaagcgacttccagtgttgaccctgaaaatgaacaggctcttttatctgcg
attgaggaactgactaaaaataaaactttaatttccatagctcaccgcttgagtacagta
caaaaggctgaccaaatcattgtaattgataatggtcaaatcagacaaaagggcactcac
aaacagcttagccaagaggatggtatttacaggaatttccttaaattgcgtgtggaagca
accggctggcaattataa
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