Lachnoclostridium sp. YL32: A4V08_12495
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Entry
A4V08_12495 CDS
T04430
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4V08_12495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lacy02000
]
A4V08_12495
Transporters [BR:
lacy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A4V08_12495
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ANU46494
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All DBs
Position
2765061..2766119
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AA seq
352 aa
AA seq
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MKKTIAMALCAALTLTACGGGAATGDSKADSNGKQKLVLSTYGLSEDISAEEVYAPFEQK
FNCEIVTETGGTNDRYTKLAADSESSIDVIELSQAMTAKGIEEGLFEDIDLSKIENAADM
ITAAKTMADAGQGVAYTINSIGIMYNPDAVDFDIKGFDDLWDARLEGMVSLPEITTTFGP
AMVYMASDHAGVDIKSDNAEAAFKALEELKPNLVKTYAKSADLINMFTSGEVAVAVVGDF
GVPTIQAANPDLVYVTPDITYANFNTISITKNCKNKDLAYEYLNYRLSPELQTKTGRALN
EAPTNKKVEFTDQESKNMTYGDKAANAKVLDYSFVNPQLNSWIDQWNRIINN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacaattgcaatggcactttgcgcagcattgacactgaccgcctgcgggggc
ggcgcagccacaggagactccaaggcggattccaacggaaagcagaagctggtgctttcc
acctatgggctgagcgaggatatttccgctgaggaagtttacgctccctttgagcagaaa
ttcaactgtgaaatcgtcacagagacagggggcaccaatgaccgttataccaagctggct
gcggacagtgaatccagcatcgatgtgattgaactgtcccaggccatgactgcaaagggg
attgaggaagggctgttcgaggatattgatttaagtaagattgagaatgcggccgatatg
attacggctgcaaaaaccatggcggatgcaggacagggcgtggcttacaccattaacagc
atcggtatcatgtacaatccggatgcagttgattttgatattaagggctttgacgacctg
tgggatgccagactggaaggcatggtatcccttccggagattaccactacctttgggccg
gccatggtatatatggcaagcgaccatgcaggcgtggacattaagagcgacaacgctgag
gctgcatttaaggcccttgaggagttaaagccgaacctggttaagacatacgccaagtcc
gccgacctgattaacatgtttacttccggtgaagtggcggttgctgttgtgggtgatttt
ggtgttcctaccatccaggcagccaacccggatcttgtttatgtgacaccggacatcaca
tatgccaactttaataccatcagcattaccaagaactgtaagaataaggatctggcctac
gaatatctcaactaccgtttaagccctgagcttcagaccaagacaggcagggccctgaac
gaggcgcccaccaacaaaaaggttgaattcacggaccaagagtctaagaacatgacatac
ggcgacaaggccgccaatgcaaaggtgctggattactcctttgtgaacccgcagttaaac
agctggattgaccagtggaaccgtatcattaataattaa
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