KEGG   Lachnoclostridium sp. YL32: A4V08_13975
Entry
A4V08_13975       CDS       T04430                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
lacy  Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:lacy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lacy02048]
    A4V08_13975
Enzymes [BR:lacy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4V08_13975
Prokaryotic defense system [BR:lacy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    A4V08_13975
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C Helicase_RecD PhoH AAA_22
Other DBs
NCBI-ProteinID: ANU46748
LinkDB
Position
complement(3054430..3056607)
AA seq 725 aa
MQYYAHISDDKMRRQTVKEHLTGTARRSELFAEAFRCGAWGYGCGILHDIGKYSQGFIKR
LEGGSITDHATAGAQEMMGLYARTNPLAAYCAAYCISGHHSGLLDGGRNGDTAGEATLQG
RLKKQLEDYSPYKDEVEMPDFPGLPFRQIGKGGFSLSFFIRMLFSCLVDGDYLDTEQFML
GHDAGRGDHDCMDVLLRRLESHVESWLSNDDLISVNGRRTAILKACLQAGRRKQGLYQLT
VPTGGGKTVSSLGFALRHAVEHGLDRIIYVIPYTSIIEQNAQVFKEILGKKNVLENHCNV
TYEDNESARELKLEQLAAENWDKPVVVTTNVQFFESLFASRTSACRKLHNIANSVIIFDE
AQMLPVKYLMPCIRAVSELICNYHCTAVICTATQPSLQPFFPAKIQELEAAELCPDVKGQ
YDFFKRTRIHLAGRISQENLVKELEGRHQVLCILNSRKRVQRIYESIEDRGTYHLSTLMY
PKHRKELLKEIRGRLSSGEPCRLISTSLVEAGVDFDFPAVYRELAGIDSVIQAAGRCNRE
GKRDPEECITQVFTLEEEEDIHIPQELKLPISVAGQIVGKYEDISSPKAIGEYFTRLYRY
KGEGLDAKDVVEQFEQGSRSFMFPFASVASGFRLIENNTRTILIDTEPEAAQIAMQIRRG
EHNRELIRQAGQYCVNVFEHDFEALNGAGRLEQIDQEFYVLRNKEQYTRERGLVIDVSRG
DAVMF
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgcaatactacgcgcacatcagcgacgacaagatgcgaaggcagacagtgaaggagcat
ctgacagggacggccaggcgttctgaactgttcgcagaggctttccggtgcggagcatgg
gggtatggatgcggaattctgcacgatattggaaaatattcccagggattcatcaagcgt
ctggaaggcggttccattacagaccatgccacggcgggggcccaggagatgatggggctg
tatgccaggaccaacccgctggctgcttattgcgccgcttactgtatcagcggccatcat
tcgggacttctggacgggggaaggaacggcgacacggcaggggaggccacgcttcaggga
aggcttaagaagcaattagaggattacagtccatacaaggatgaagttgagatgccggat
tttcccgggctgccgttcagacagataggcaagggaggattcagcctgtcatttttcatc
agaatgctgttttcatgccttgtggacggagattatctggatacggagcaatttatgctg
ggacacgatgcgggaaggggagaccatgattgtatggacgtccttctcaggcgtctggaa
agccatgtggaatcctggctttccaatgatgatttgatatctgtaaatggaagaaggacg
gctatactgaaggcatgtctgcaggcaggcagaaggaagcaggggctgtaccagctcacg
gtacctaccggcggaggcaagaccgtatcctcccttgggtttgccctgcgccacgcagtg
gaacatggtcttgaccggattatttatgtgatcccgtatacgagtatcatcgaacagaac
gcccaggtatttaaggaaatcctgggaaagaaaaatgttctggaaaaccattgtaatgtg
acgtatgaggacaatgagagcgcccgggagttaaaattggaacagttggccgccgagaat
tgggataagccggtggtggtcactacaaatgtccaattttttgaatcactctttgcctcc
aggacttcggcatgccgcaaactgcataacattgccaacagtgtgatcatatttgatgag
gcacaaatgctgccggtgaaatatctgatgccatgtattcgggctgtcagcgagcttata
tgtaattatcactgcacggctgttatctgtacggctacccagccgtccctgcagcccttc
tttcctgcaaagatacaggaactggaggcggcggaactatgtccggatgtaaaaggacaa
tatgattttttcaaaagaacaaggatacacctggcaggacggatatcccaggaaaatctg
gtgaaggagctggaaggccggcatcaggtcctttgtatcctgaacagcagaaagcgtgta
cagcgtatctacgagtccattgaggaccggggaacgtatcatttatccacattgatgtat
ccaaagcacaggaaggagcttttgaaggagattcgcggccgtctgtcatcaggagaaccg
tgccggcttatttccaccagcctggtggaagcaggcgtggattttgattttccggccgta
tacagggagctggccggaattgacagcgtgatccaggctgccggaaggtgcaacagggag
ggaaagagggatccggaagaatgcattacccaggtatttactttggaggaagaggaggat
atccatataccacaggaattaaaactgcctatttcagttgcggggcagattgtgggaaag
tatgaagatatatcatcgccgaaggccattggagaatatttcaccaggctgtaccggtat
aaaggggagggattggacgcaaaggatgtggtggagcagtttgagcagggaagccgttcc
tttatgtttccatttgcatcagtggcttcagggttccgcctgattgagaacaataccagg
accattttaattgatacagagccggaagcagcgcagattgccatgcaaatccggcgggga
gagcataacagggagcttatcaggcaggcgggacagtactgtgtaaatgtttttgaacat
gattttgaagcgttaaacggcgctggccgccttgaacagatagaccaggaattttatgtt
ctgaggaataaggagcagtatacaagggagagaggacttgtgattgacgtaagccgcggc
gatgccgtcatgttttga

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