Lachnoclostridium sp. YL32: A4V08_15785
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Entry
A4V08_15785 CDS
T04430
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy03030
DNA replication
lacy03430
Mismatch repair
lacy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4V08_15785
03430 Mismatch repair
A4V08_15785
03440 Homologous recombination
A4V08_15785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lacy03032
]
A4V08_15785
03400 DNA repair and recombination proteins [BR:
lacy03400
]
A4V08_15785
Enzymes [BR:
lacy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4V08_15785
DNA replication proteins [BR:
lacy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A4V08_15785
DNA repair and recombination proteins [BR:
lacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A4V08_15785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
TIP49
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_5
AAA_assoc_2
AAA_19
AAA_30
AAA_7
AAA_16
AAA_14
AAA_18
DUF815
TsaE
Motif
Other DBs
NCBI-ProteinID:
ANU47047
LinkDB
All DBs
Position
complement(3422270..3423952)
Genome browser
AA seq
560 aa
AA seq
DB search
MSYTALYRKWRPVSFEDVKGQDPIVQTLKNQITSERIGHAYLFCGTRGTGKTSIAKIFAR
AVNCEHPVDGSPCNECPTCRSIQSGSSMNVVEIDAASNNGVENIRDIREQVQYPPTEGRY
RVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTEVHKIPITILSRCQRYDFKRISL
ETIADRLRELTQAEQIQVEDKALLYVAKAADGSLRDALSLLDQCVAFHYGRVLTYDNALE
VLGAVDSSVFSQMFGAIVEGRTRDCICSLEEIVIQGRELGQFVTDFIWYMRNLLLIRSAD
DAEGLVDMSEENLKQLRSDAGKAEGTTLMRYIRIFSELSNQLRYASQKRVLVEVALIKLT
RPSMEPNLDAILQRLGDLEAQMEDLEAGRMAIPMTAAYQAAGSPPAGQVPQAGAGPGQDG
GTAPHTAAPYAPGLQAEPGVMPEKAALPQAQLEDLKLVRNEWAKIVRSMGGGARSYLRDT
VVEPGGEGCLTIVFMDPMNYDMGKRPTVIGELERYVEANFSRSIYFKTRLAGRGERLNTI
YVTQEELEEKIHMDITYEDE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatacggcgttataccgcaaatggcgtcctgtttcctttgaggatgtaaaaggc
caggacccgattgtgcagacactgaaaaaccaaataacgtcggagcgtatcggccatgca
tacctgttctgcggtaccaggggaacgggtaagaccagtatagccaagatatttgccagg
gcggtgaactgcgaacatccggtggatggcagtccctgtaacgagtgtcccacctgcagg
tccattcagtcgggttcctccatgaatgtggtggaaattgatgccgcctccaacaacggt
gtggagaacatacgtgatataagggaacaggtgcagtatcctcccacagagggacggtac
agggtctatatcattgacgaggtccatatgctttctattggagcctttaacgctctgtta
aagacactggaggaacccccgtcctatgtgattttcatattggctaccaccgaagtgcac
aagattccaattacgattctctcccgctgccagcgctatgattttaagcgcatatcctta
gagaccatagcggaccgcctgagggagctgactcaggccgagcagatacaggtggaggac
aaggcgcttctctatgtggcaaaggcggctgacggctccctcagggatgctttaagcctt
ttggaccagtgtgtggcctttcattacggaagggtgctgacctatgacaatgccctggag
gttctgggggcagtggattccagcgtgttcagccagatgttcggcgccattgtggagggc
aggacaagggactgtatatgcagcctggaggaaattgtgattcagggccgggagctgggc
cagtttgtcactgattttatatggtatatgagaaacctgcttttaatccggagcgcggac
gacgcagagggcctggtggatatgtcggaggagaatttaaagcagctgagaagcgatgcg
ggcaaggcggaaggaaccacgttgatgcggtatatccgtatcttttccgaattgtccaac
cagctgcgctatgccagccagaagcgggtgctggtggaggtggcgcttatcaagctgaca
cgtccatccatggagcccaacctggatgccattttgcagcggttaggagatctggaagcg
cagatggaggatttggaggcaggccgcatggccattcccatgacagctgcttatcaggcc
gcaggcagccctcctgccggacaggtgccgcaggcgggggccggcccggggcaggatggg
ggaacagcaccccatacagcggcgccttatgctccggggcttcaggcagagccgggggtt
atgccggaaaaggcggcccttccccaggcccagctggaagacttgaagctggtgagaaac
gaatgggccaagatagtccgcagcatgggaggcggtgccaggtcatatctgcgggacacc
gtggtggagcctggcggagaaggctgcctgaccattgtgtttatggatcccatgaactac
gatatggggaagcggcccactgttataggggaactggagcgctatgtggaagctaatttc
agcagatccatttactttaagacaaggctggccggccggggcgagcgccttaatacgatt
tatgtgacccaggaagaattggaagagaagattcatatggatattacatatgaagatgaa
taa
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