Lachnoclostridium sp. YL32: A4V08_19895
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Entry
A4V08_19895 CDS
T04430
Name
(GenBank) hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lacy03019
]
A4V08_19895
Messenger RNA biogenesis [BR:
lacy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4V08_19895
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ANU47731
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All DBs
Position
4231301..4232245
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AA seq
314 aa
AA seq
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MRYIGTFREGMHIADVYLCKNKQIALTKNGKEYGNLVMQDKTGTIDAKIWDLGSPGVGEF
ETMDYVRVEADVTLFQNSFQLNVRRIRRAQEGEYVEADYLPVSKKDIKKMYEELLGYIRS
VKNPYLQKLLCGYFVENAAFAKAFQFHSAAKTVHHGFVGGLLEHTLSVTKLCDYYAGYYP
MINRDLLLTAAIFHDIGKTRELSRFPENDYTDDGQLLGHIIIGTEMVGESIRSIPGFPEK
LATELKHCILAHHGELEYGSPKKPALLEALALNFADNTDAKMETMIEALQSGGENKGWLG
YNRLLESNIRKTTE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagatatatcggcaccttcagggaaggtatgcacattgcagatgtgtacctgtgcaag
aacaagcagattgccctcacgaagaatggcaaggaatacggcaatctggtaatgcaggac
aagacaggtaccattgacgccaagatatgggatttgggttctccgggagtcggggaattt
gagaccatggattacgttcgtgtagaggcggatgtgactctgttccagaactccttccag
ctgaatgtgcgccggattcgcagggcccaggagggagagtatgtggaggcggattacctg
ccggtgtcaaagaaggatataaagaaaatgtacgaggagctgctgggatacataagaagt
gtgaagaatccctatcttcagaagctgctgtgcggctattttgtggagaacgcggctttt
gcgaaagcgttccagttccattccgcagccaagaccgtgcatcacggattcgtgggcggc
ctgttggaacacacgctcagcgtgacaaagttgtgtgattactatgccggatattacccg
atgattaaccgtgatttgctgctgacggctgctatcttccacgatattggtaagaccagg
gagctttcacgctttccggagaatgattatactgacgatggacagcttctgggccatatt
atcatcggtactgagatggtgggtgaaagtatccgctctataccgggatttccggagaag
ctggctacagagcttaaacactgtattctggcccatcacggggaattagagtacggctca
cccaagaagccggcgcttttggaggcattggcccttaactttgccgataacacagatgcc
aagatggagaccatgatagaggcgctgcagtccggcggggagaataaaggatggctgggg
tacaaccggctgctggagtctaatatcaggaagacaacggaatag
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