Lachnoclostridium sp. YL32: A4V08_22225
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Entry
A4V08_22225 CDS
T04430
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4V08_22225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lacy03021
]
A4V08_22225
03400 DNA repair and recombination proteins [BR:
lacy03400
]
A4V08_22225
Enzymes [BR:
lacy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4V08_22225
Transcription machinery [BR:
lacy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4V08_22225
DNA repair and recombination proteins [BR:
lacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4V08_22225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
PASTA
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
ANU48120
LinkDB
All DBs
Position
4699138..4700100
Genome browser
AA seq
320 aa
AA seq
DB search
MFDFEKPNIEIAEISEDKRYGKFVVEPLERGYGTTLGNSLRRIMLSSLPGAAVSQVKIDG
VLHEFSSIPGVKEDVTEIIMNIKSLAIKNNSDTDEPKVAYIEFEGEGVITAADIQADADI
EIMNPDQIIATLSGGTDSKFYMELTITKGRGYISADKNKNDDLPIGVIAVDSIYTPVERV
NMAVANTRVGQQTDYDKLTLEIYTNGTLAPDEAVSLAAKVLSEHLNLFIDLSENAKTAEI
MVEKEDNEKEKVLEMNIDELELSVRSYNCLKRAGINTVEELCNRTSEDMMKVRNLGRKSL
EEVLAKLKELGLQLNPSDDN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattttgaaaaaccaaacattgaaatcgcagagatttcagaagacaagagatac
ggcaagtttgtagttgaaccacttgagagaggttacggcactacgctgggcaattcctta
agaagaatcatgctttcttctttacccggagccgcagtgagtcaggtaaaaatcgatggc
gttttgcatgagttcagttccattcccggagttaaggaagatgtgactgaaattattatg
aacatcaaaagcttagcgattaagaacaacagcgataccgatgagcccaaggttgcatac
attgaatttgaaggcgaaggtgtaattactgcagctgacatccaggcggatgctgatatc
gagatcatgaatccggatcagattatcgccaccttaagcggcggtacggacagcaagttc
tatatggaacttaccatcaccaagggccgcggctatatcagcgccgataagaataagaac
gacgatttaccaatcggggtcatagcggttgattccatctacactcctgtggagcgcgtg
aacatggcggtagccaatacacgtgtgggacagcagacggactacgataagcttacactt
gagatttacaccaacggcaccctggctcccgacgaggctgtcagcctggccgctaaggta
ttaagcgagcacctgaacctgttcattgacctttccgagaatgccaaaaccgctgagatc
atggtagagaaggaagacaatgagaaagagaaagtgcttgagatgaatatcgacgaactg
gagctttccgttcgttcctacaactgtctgaagagagccggcatcaacacagtggaagaa
ctgtgcaacaggacatctgaggacatgatgaaggttcgtaacttaggccgcaagtcctta
gaggaagtactggccaagttaaaggaattaggcttacagctgaatccaagcgacgacaac
taa
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