Lachnoclostridium sp. YL32: A4V08_24935
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Entry
A4V08_24935 CDS
T04430
Name
(GenBank) transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lacy03000
]
A4V08_24935
Transcription factors [BR:
lacy03000
]
Prokaryotic type
Helix-turn-helix
Other families
A4V08_24935
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
AAA_2
Mg_chelatase
AAA
PAS
HTH_11
PAS_8
HTH_8
HTH_23
HTH_7
AAA_7
KORA
HTH_Tnp_1_2
MCM
HTH_31
PAS_9
DUF1677
HTH_10
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ANU48572
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Position
5225629..5227530
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AA seq
633 aa
AA seq
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MVTVRMFIPYMNMKSRFEAAVSRLEPQDDVKVELLHVFGTPESLSRYGDADILVARGMTY
DRLRYLFPEKHVVEIQLSSFDILKALICARQEFHPKKIALCVRYMDDSAVSELEKLCQAE
IAYYTVHDEASTLEAIHRARAGGADVFVGAGTMCGLCDKESLNRVHIHTKDIAIEQALKQ
AMDAARTINMERARSKMTSTILNTSADALIAVNGSGLIQALNNQAYRTFGLSSQADYTGR
PVEEVCPALKWKHVVETGREREEVIQWKDRKLYTEYRPVLVDKMGKGAIIVARYTEQIIE
AETKIRQSLAKQGLTAKYSFDDIIGSSLAIRENILMAKRYSRVDSNVLIVGETGTGKELF
AHSIHRESRRSAEPFVALNCAALPENLLESELFGYEPGAFSGASKNGKTGLFELAHKGTI
FLDEIGEIPISLQAKLLRVLQEREIRRIGSNRVQPVDVRVISATNINIEEKIREGQFRAD
LYYRLNLLDITIPPLRERGDDIREMVDFYLTRFACEMGKPIPRLSREAVDLMTHYGWPGN
VRELRNICERLIVLSDTAEIGLREIQMLKIFRKKEGLLPGTETPVKEQALPETEIMYANL
KPRKKKQDIAKELGVSRTTLWRMEKMAREQKKQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagtgcggatgtttattccatatatgaatatgaagagcaggttcgaggcggca
gtgagccgtctggagcctcaggatgatgtcaaggtggagcttcttcatgtattcggcacc
ccggaatccctgtcgcggtacggggacgccgacattttagtggccagaggcatgacctat
gaccgtctcaggtatctgtttccggagaagcatgtggtggagatacagctctccagtttt
gatatactgaaagccctgatttgcgccagacaggagttccatcctaaaaagatagccctc
tgtgtgcggtatatggatgatagcgccgtgtccgagctggagaaattgtgccaggcggag
attgcgtattatacggtccatgacgaggcatccactctggaggccatccacagggccagg
gcaggcggagccgacgtgttcgtgggagccggaaccatgtgcggactgtgtgataaggaa
tcattgaaccgggttcatatccacacaaaggatatagccatagagcaggccttaaagcag
gccatggatgcggccaggaccatcaatatggagcgggccaggtccaaaatgaccagcacc
atcctcaacaccagcgccgatgccctgattgctgtaaacggcagcgggctgattcaggca
ttgaacaaccaggcgtaccgcacctttgggctttcctcccaggctgactacacaggacgt
cccgtggaggaggtctgccctgcccttaagtggaagcacgtggtggagaccggacgggaa
cgggaggaggttatccagtggaaggacaggaaactgtacacggaatacaggcccgtactg
gtggacaagatgggaaagggcgccatcattgttgcccgctacaccgagcagattattgag
gcagagactaaaatccggcagagccttgcgaaacagggacttacggccaagtattccttt
gacgacatcattggaagcagccttgccatccgggagaatatccttatggcaaagcgttac
agccgggtggattccaatgtgctgattgtgggagagacaggaactggcaaagagcttttc
gcccacagcatccaccgggagagcaggcgcagcgcggaaccttttgtggcgttaaactgt
gccgccctgcctgaaaacctgctggagagcgagctctttggatacgaacccggcgcgttt
tccggggcgtctaaaaacggtaagacgggcctgtttgaactggcccataagggaaccatt
tttctggatgaaatcggggagattcccatatctctccaggcaaagctgctgagggtgctt
caggaaagggaaatccgccgcatcggcagcaaccgggtacagccggtggatgtgcgtgtt
atttccgctaccaatataaatattgaggaaaaaatccgggaaggacagttccgcgctgac
ctgtattaccgtcttaacctgttggacatcaccatcccgcctctcagggaacggggagac
gatatccgggaaatggtggatttctacctgacccgctttgcctgcgagatgggaaagcct
atccccaggctgtcaagggaggcagtggatttgatgacccattacggctggcccggcaat
gtgcgggagctgcgcaatatctgcgagcgtctgattgtgctgagcgacaccgcggaaatc
ggactcagggaaatacagatgctaaagatattccggaaaaaagaaggcctcttgcccggc
acagagacgcctgtaaaggaacaggccctgccggaaaccgagattatgtatgccaatttg
aagcccaggaagaaaaaacaggatatagcaaaggagctgggggtcagcaggacgaccctg
tggcgcatggagaagatggcgcgggaacagaagaaacagtga
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