Lachnoclostridium sp. YL32: A4V08_27105
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Entry
A4V08_27105 CDS
T04430
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacy03400
]
A4V08_27105
Enzymes [BR:
lacy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4V08_27105
DNA repair and recombination proteins [BR:
lacy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A4V08_27105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
AAA_19
TetR_C_17
DUF6013
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANU48936
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All DBs
Position
5686369..5689953
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AA seq
1194 aa
AA seq
DB search
MRSFRCPACRKERENVALQFILGGAGSGKTRMLYDRVIRESMEHPEQKCLVVVPEQFTMQ
TQKEIIRLHPRHGIMNIDILSFKRLAYRVFEDLGVRIPVVLDDMGKSMVLRKVAGLKRGK
LSLYKGHLEQSGFISQLKSQISELSQYGITPDMLREVRGETDASLLAQKLEDLEVIYSGF
REYIESHYITAEEILDILCRELPRWEPLKDSIILLDGYTGFTPVQYRLVELFLMHARDVV
CTVTIDSRENAYKESSIQHLFYMSRHTVCRVASMAKQHGIPKKEDIICNRRPAWRYDESP
ELDFLEQNLYRYSGRTWEGNVERIQVFKGRNPAGEAAYVCSRIEQMIKEEGMRYRDAAVI
TGDLPSYGRELAHQFDEAGIPYFLDDKKSILENPMVELIRAALEMVKDFSYESVFRYLKT
GLVYEKDGKRIESEADGNTAQADDENIFDGSREHVEQMTDRLENYVRALGIRGWKRWDSC
WERQYRGGEKLNMKELNGYRMWILEPLRPLREAFKAEEATIASVTAALRQFLEHMRLREK
LEEYRDFFLERGEPGDENLAREYGQVYDRVLELFERLEGLLGAEKADMKNYIQILDAGFQ
EIQVGVIPATVDQVMVGDITRSRLEAVKVLFFVGVNEGTVPQRKSGASLLSDRDRAALRK
MDIELAPTVKEDGCIQKFYLYLMMSKPSGQLVITYAGLTSDGKSQRPSNLMGEVGKLFPG
MEILDEHSVEWPVRTGRDARELLIKGLRGMQEQGEDDREREEAAFMQLFQHFYTSAEHRD
KVRQLVDAAFYSYEERGIGRAAARALYGRELQGSVTRLEQFASCAYAHFLRYGLELMERQ
EYELEAVDMGNLFHQSIDRCFACMKDRGQDWRDLTEEGRKSLVKECVTQVTEEYGNTIMS
SSARNAYLAGRVERITDRTIWALAEQVKKGDFEPVGFEVSFSAIDNLKAMRIGLSEDEEL
QLRGRIDRMDLCRDEDHVYVKIIDYKSGTTSFDLAALFYGLQLQLVVYMDAAVEMEERRH
PDKEVVPAGIFYYHIGDPIADKQEGMDEKDIEKQILKQLRMKGLVNSELDIIHHLDREIE
KESDVIPVAIKDGYVQESRSSVASTRRFQDLRRFVNRKLREAGQDILMGNVDLKPYKQGN
RTACDYCPYHAVCGFDTKTAGYGYRKLKGLKPEEIWAELEAEGDEETDGSELDQ
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagaagttttcgttgtcccgcctgccggaaggagagagaaaacgtggcgttacagttc
atattgggaggggcaggctcgggaaagaccaggatgctctatgacagggtcataagggag
tccatggagcatccggaacaaaagtgcctggtggtggtgccggagcagtttaccatgcag
acacagaaggaaatcatccggcttcaccccagacacgggattatgaatatagacatcctc
agctttaagcgtctggcttaccgggtattcgaggacctgggagtcagaatcccggttgtt
ctggatgatatgggaaaatccatggtgctgcgcaaggtggcaggattaaagagaggaaag
ctgtccctctataagggccatctggagcagtccggcttcatcagccagcttaagtcccag
atttcggagctgtcccagtacggtatcacgccggacatgctgagagaggtgcggggggag
acggacgcctctcttctggcccagaagctggaggatctggaggtgatttacagcggtttc
agggagtatatagagagccactacatcacggcagaggagattctggacattctgtgcagg
gagcttccaaggtgggagccccttaaggacagtatcattcttctggacggatacactggc
tttactccggttcagtacagactggtggaactgttcctgatgcacgccagggatgtggtg
tgcacggttaccattgattccagggaaaacgcctacaaggagagcagtatccagcatctc
ttttatatgagccgccatacggtgtgccgtgtggcctccatggcaaagcagcatggaata
ccgaagaaggaggacataatctgtaaccggcgtccggcctggcggtatgatgagagcccg
gagctggattttctggaacagaacctgtaccggtattctggcagaacctgggaggggaat
gtggagcgcatccaggtgttcaagggacgcaacccggcaggggaggcagcctatgtgtgc
agcaggattgagcagatgataaaggaggaggggatgcgttaccgggatgctgccgtcatt
accggggaccttccatcctatggacgggagctggcccaccagttcgatgaggccgggatt
ccttatttcctggatgataagaagagtattctggaaaatcccatggtggagctgatacgg
gcagcgctggagatggtgaaggatttctcctacgagagcgtgttccgttatctgaagaca
ggtctggtgtatgagaaggatgggaagcggatagagtcagaagcggacgggaacaccgca
caggcagatgatgagaacatatttgacggttccagggaacatgtggagcagatgacggac
cggctggaaaattatgtgcgggctctgggcatccgggggtggaaacgctgggattcctgt
tgggaacggcagtacagaggcggagaaaagctgaacatgaaggagctgaacggataccgt
atgtggattctggagccgctgcggccgctgcgggaggcttttaaggcagaggaagccacc
attgcctctgtcacggcagccctgcgccaatttttagagcatatgaggctgagggaaaag
ctggaggaatacagggatttctttctggagcgaggagagccgggggatgagaacctggcc
agggaatacggccaggtctatgaccgtgttctggaactgtttgaacggctggaaggactg
ctgggggcggaaaaggcggacatgaagaactatatccagattctggacgccggtttccag
gaaatccaggtgggagtgattccggccacggttgaccaggtcatggtgggggatatcacc
cgaagccgtctggaggcagtgaaggtactgttttttgtgggggtgaacgagggtacggtt
cctcagagaaagagcggagcaagccttttatcggaccgtgacagggctgctctcagaaaa
atggatatagagctggctcccacagtgaaagaggatggctgtattcagaaattttacctg
tatcttatgatgtcaaagccctccggacagctggtgatcacctatgccggacttacatcg
gacggcaagagccagagaccctccaatctcatgggcgaagtgggaaagctgtttccggga
atggaaatcctggacgagcattccgtggagtggccggtgcggaccgggagggatgccagg
gagctgcttataaagggactccggggaatgcaggagcagggtgaggatgacagggagcgg
gaggaagcggcctttatgcagcttttccagcatttttatacatcggcggagcaccgggat
aaggtgaggcagctggtggacgctgctttctattcctatgaggaaaggggaatcggccgg
gcggctgccagggccctttacggcagggaactacagggcagcgtgactcgtctggaacag
tttgcctcctgtgcctacgcccatttcctgcggtatggactggaactgatggagaggcag
gagtatgagctggaagcggtggacatgggcaacctgttccaccagtccatcgacaggtgc
tttgcctgtatgaaggacagggggcaggattggcgggatttgaccgaagaggggagaaag
agccttgtaaaggaatgcgtgacccaggtgacggaggaatacggcaacacaatcatgtcc
agctcagcccgcaacgcgtacctggcaggcagggtggagcggattacggaccgcaccata
tgggctctggcagagcaggtgaaaaagggcgattttgagccggtggggttcgaggtgtcc
ttttcagccattgataacctgaaggccatgcgcatcggcctgtcagaggatgaggagctg
cagcttcgggggcgcattgaccgcatggacctgtgcagggacgaggatcatgtctatgtg
aagatcattgattataagtcaggaaccacatcctttgacctggctgccctgttttatgga
ttgcagctccagctggtggtttatatggacgcggcggtggagatggaggagaggagacac
ccggacaaggaggtggtgcctgccggcatcttctactaccacataggtgacccgatagcg
gataagcaggaaggcatggatgaaaaggatatcgagaaacagatattaaagcagctcagg
atgaaggggctggtaaacagtgaactggatattatccatcatctggacagggagattgag
aaggaatccgatgtgatacccgtagcaatcaaggacggttatgtccaggaaagccgctcg
tccgtggccagcaccagacgcttccaggacctgcgccggttcgtgaaccggaagctcagg
gaggccgggcaggatatcctgatgggaaatgtggacttaaagccttacaaacagggaaac
aggacggcctgcgactactgtccctaccatgctgtgtgcggttttgacaccaagacagca
ggctatggataccgcaagctcaagggacttaagcctgaggaaatctgggcggaattggaa
gctgaaggagacgaggaaacagatggcagtgaattggaccagtaa
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