Lachnoclostridium sp. YL32: A4V08_31180
Help
Entry
A4V08_31180 CDS
T04430
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy02020
Two-component system
lacy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4V08_31180
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4V08_31180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lacy03021
]
A4V08_31180
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lacy02035
]
A4V08_31180
Transcription machinery [BR:
lacy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4V08_31180
Bacterial motility proteins [BR:
lacy02035
]
Flagellar system
Flagellar assembly proteins
Stator
A4V08_31180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
DUF1492
HTH_37
UPF0175
Phage_antitermQ
HTH_Tnp_ISL3
PhyR_sigma-like
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ANU50700
LinkDB
All DBs
Position
6519062..6519829
Genome browser
AA seq
255 aa
AA seq
DB search
MQKGMEEMTNEELLVLYQESRDQGIKQELTLRYLYLAKSVAIQMNNLYSDFMQMDDIIHE
GVIAIMKGIDRYDPERDSKFETFISRRIRGTVIDLIRKNNWIPRNYHKNRQSIENARQYL
YEKQGHIPSDEEIAGYLKMNLRKYQRIQRMSTMMNVLSLDMITRGDENGQAIQVPSDDIE
GQPEDIFFKGETVKTLVEAVEKLKEKEKLVISLYYVEELSMTQVAQVLNVSEPRISQIHS
EAIRKLKAYMKSHIG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagggaatggaagagatgacaaatgaggagctgcttgtcctttaccaggagagc
agggaccagggaataaaacaggaattaacactccggtatctttacctggcaaagtctgtg
gcaattcaaatgaacaatctgtactctgattttatgcagatggatgatatcattcatgag
ggagttattgcaatcatgaaaggtattgaccgatatgatccggaacgggacagtaaattt
gagacatttatttcgcggcgcatacggggaacagtgatagatcttatccgcaaaaataac
tggataccaagaaattatcacaagaaccgtcagtctattgaaaatgcaaggcagtatttg
tatgaaaagcaggggcatataccttccgatgaagagatagcagggtatttgaagatgaat
ctaagaaaatatcagcggattcagaggatgagcaccatgatgaatgtactttcattggat
atgattacacggggggatgaaaacgggcaggcgattcaggtgccaagcgatgatattgag
ggacagccggaggacattttttttaagggagaaacggtaaaaacactggttgaggcagtt
gaaaagctgaaagaaaaggaaaagctggttatctctctttattatgtagaggaattgagc
atgacgcaggtggctcaggtcttaaatgtgagcgagccaaggatttcccaaatccacagc
gaggcgattcgaaagctgaaagcatacatgaaatcacatattggataa
DBGET
integrated database retrieval system
