Lachnoclostridium sp. YL32: A4V08_32415
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Entry
A4V08_32415 CDS
T04430
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4V08_32415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lacy03400
]
A4V08_32415
DNA repair and recombination proteins [BR:
lacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4V08_32415
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A4V08_32415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
AAA_22
DUF87
Microtub_bd
AAA_16
Phage_Mu_Gp48
FlaG
Thg1C
Motif
Other DBs
NCBI-ProteinID:
ANU49826
LinkDB
All DBs
Position
6764732..6766711
Genome browser
AA seq
659 aa
AA seq
DB search
MEFKLHSEYQPTGDQPQAIEALVKGFQEGNQFQTLLGVTGSGKTFTMANVIQRIQKPTLI
IAHNKTLAAQLYSEFKEYFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSSINDEIDKL
RHSATAALSEREDVIIVASVSCIYGLGSPIDYKEMVISLRPGMIKDRDEVIHKLIDIQYD
RNDMDFKRGTFRVRGDVLDIYPAYSDGVAYRVEFFGDEVDRISEIDSLTDETKAQLGHVA
IFPASHYVVPKEKMMEATENILAELEERVTFFKSEDKLLEAQRISERTNFDVEMMRETGF
CSGIENYSRHLTGGLPGEPPCTLIDYFPEDFLIIVDESHITLPQVRGMYAGDRSRKTTLV
DFGFRLPSALDNRPLAFPEFESKINQMMFVSATPSAYEAEHELMRVEQIIRPTGLLDPEI
SVRPVEGQIDDLVSEVNKEVAARHKVLITTLTKRMAEDLTDYMREVGIRVKYLHSDIDTL
ERAEIIRDMRMDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTIGRAA
RNSEGHVIMYADKVTDSMAVAIEETNRRRQIQQRYNEEHGITPTTIKKAVRDLIAISKAV
NADDKHLKKDPESMDEKELKKLSKELEKKMHQAAAELNFEEAARLRDRMVEIKKMLQDM
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaattacactcagaataccagcccaccggcgaccagccgcaggcgattgaa
gcccttgtaaaaggcttccaggaaggcaaccaattccagactttactaggggttacgggc
tctggaaagaccttcaccatggcaaatgtcatccagcgaatccagaagccgaccctcatc
attgcccacaacaaaacccttgccgcacagctctacagcgagtttaaggaatattttccg
gagaatgcggtcgagtattttgtctcctactatgactactaccaacccgaagcctacgtc
ccgtccacggacacctacattgaaaaggattcgtctattaatgatgagatagacaagctg
cgccattccgccaccgccgccctgtccgaacgggaggacgtgattatcgtggcttccgta
tcctgtatctacggtctgggcagtcctattgattataaggagatggttatttcactgaga
cccggtatgatcaaggacagggacgaggtaattcacaagctcatcgacattcagtatgac
cggaatgatatggactttaagcggggaaccttccgtgtgcggggggatgtactggatatt
tatccggcatactccgatggggtggcctaccgggtggaattctttggggacgaggtggac
cggatatcggaaatagattctctgaccgatgaaaccaaagctcagctgggtcatgtggct
attttcccggcatcccattatgtggtgccaaaggaaaaaatgatggaagccacagagaac
atcctggcagagctggaggagcgcgttacattctttaagagtgaggataagcttctggag
gcccagcgcatatcggaacggactaactttgatgtggagatgatgcgtgagaccggattt
tgttcaggcatagagaattattccaggcatctgaccggaggcctgcccggggaaccgccc
tgtacgctgattgactactttccggaagatttcctgattattgtggacgagtctcacata
actcttcctcaggtgcgcggaatgtatgccggggaccggtccagaaagaccacgctggtg
gattttgggttccgcctgccgtctgccctggataacagacctctggcgtttcctgagttt
gagtctaaaatcaatcagatgatgtttgtttcagcgactccgtctgcttatgaggcagag
catgagcttatgagagtggaacaaatcatacgtcccaccggacttttggatccggagata
tcggtgcggcctgtggagggtcagattgacgatctggtttctgaagtaaacaaggaagtg
gcggctcgtcacaaggtgcttatcaccactctgaccaaacggatggcagaggatttgacc
gactatatgagagaggtgggtatccgggtaaaatatcttcactcggatatcgatacgctg
gaacgggctgaaattattcgggatatgcgtatggatgtgttcgacgtcctggtgggcatc
aacctgttgagggaaggacttgatattcctgaaattacactggtggctatcctggatgct
gataaggagggattcctgcgttcggagacatccctgattcagaccattggacgtgctgcc
cgcaacagcgaaggccatgttatcatgtatgcggacaaggtgacggactccatggctgtg
gcgattgaggagaccaaccgaaggcgccagatacagcagaggtacaacgaggaacatgga
attactccaaccaccatcaagaaagctgtcagggatttgattgccatatccaaggctgtg
aatgcagatgataagcacttgaagaaggatccggagtccatggacgagaaggaattaaag
aagctgtcaaaggaactggagaagaagatgcaccaggccgccgcggagctgaatttcgag
gaggcggcaaggctgcgtgacagaatggtagaaatcaagaaaatgctgcaggatatgtaa
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