KEGG   Lachnoclostridium sp. YL32: A4V08_34170
Entry
A4V08_34170       CDS       T04430                                 
Name
(GenBank) RNA polymerase sigma-F factor
  KO
K03091  RNA polymerase sigma-E/F/G factor
Organism
lacy  Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:lacy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lacy03021]
    A4V08_34170
Transcription machinery [BR:lacy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A4V08_34170
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 KORA HTH_28 HTH_3 Arg_repressor HTH_31 HTH_23 DUF3881 HTH_16 Phage_antitermQ HTH_15
Other DBs
NCBI-ProteinID: ANU50122
LinkDB
Position
7165016..7165729
AA seq 237 aa
MDETMKLINMAHAGDKAARDQLVMDNVGLIWSIVRRFSGRGYEMEDLFQIGSIGLIKAID
KFDTGFDVKFSTYAVPMIAGEIKRFLRDDGMIKVSRSIKELGVKVRAAREEMTYSLGREP
TIEEIAGRLGTSREEVAASLEAAAEVESLYRPADSGDENSTYLMDRLAQDNNDHEDLLNR
MVLKDLMEGLEEEQREIILRRYFYNETQTQIAGELGISQVQVSRLEKRILKEMRKKL
NT seq 714 nt   +upstreamnt  +downstreamnt
atggatgagaccatgaaattaatcaatatggctcacgcgggggataaagcggcaagggac
cagctggtcatggacaatgtgggactcatatggagcattgtcaggcggttctcaggccgg
ggatatgagatggaggatctgttccagattggaagcatcggactgattaaggccattgac
aaattcgacacagggtttgacgtgaaattttccacctatgcagtgcccatgattgcaggg
gaaatcaaacgctttctcagggatgacggtatgatcaaggtcagccgctccatcaaggaa
ctgggggttaaggtcagggccgccagggaggaaatgacatacagcctgggcagggagccc
accattgaggagatagcaggcagactgggcaccagccgtgaggaggtggcggcgtccctg
gaggcggcagctgaggtggagtcactgtaccgtccggctgacagcggagatgaaaattcc
acctatcttatggatcggctggcccaggacaacaatgaccatgaggatttgttaaaccga
atggttttaaaggatttgatggagggacttgaggaagagcagagggaaattatactgcgc
agatatttttacaatgagacccagacccagattgccggcgagctgggcatttcacaggta
caggtttcacggctggaaaaacgtatattgaaagaaatgaggaaaaaactgtaa

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