Lachnoclostridium sp. YL32: A4V08_34170
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Entry
A4V08_34170 CDS
T04430
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lacy03021
]
A4V08_34170
Transcription machinery [BR:
lacy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4V08_34170
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
KORA
HTH_28
HTH_3
Arg_repressor
HTH_31
HTH_23
DUF3881
HTH_16
Phage_antitermQ
HTH_15
Motif
Other DBs
NCBI-ProteinID:
ANU50122
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Position
7165016..7165729
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AA seq
237 aa
AA seq
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MDETMKLINMAHAGDKAARDQLVMDNVGLIWSIVRRFSGRGYEMEDLFQIGSIGLIKAID
KFDTGFDVKFSTYAVPMIAGEIKRFLRDDGMIKVSRSIKELGVKVRAAREEMTYSLGREP
TIEEIAGRLGTSREEVAASLEAAAEVESLYRPADSGDENSTYLMDRLAQDNNDHEDLLNR
MVLKDLMEGLEEEQREIILRRYFYNETQTQIAGELGISQVQVSRLEKRILKEMRKKL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaccatgaaattaatcaatatggctcacgcgggggataaagcggcaagggac
cagctggtcatggacaatgtgggactcatatggagcattgtcaggcggttctcaggccgg
ggatatgagatggaggatctgttccagattggaagcatcggactgattaaggccattgac
aaattcgacacagggtttgacgtgaaattttccacctatgcagtgcccatgattgcaggg
gaaatcaaacgctttctcagggatgacggtatgatcaaggtcagccgctccatcaaggaa
ctgggggttaaggtcagggccgccagggaggaaatgacatacagcctgggcagggagccc
accattgaggagatagcaggcagactgggcaccagccgtgaggaggtggcggcgtccctg
gaggcggcagctgaggtggagtcactgtaccgtccggctgacagcggagatgaaaattcc
acctatcttatggatcggctggcccaggacaacaatgaccatgaggatttgttaaaccga
atggttttaaaggatttgatggagggacttgaggaagagcagagggaaattatactgcgc
agatatttttacaatgagacccagacccagattgccggcgagctgggcatttcacaggta
caggtttcacggctggaaaaacgtatattgaaagaaatgaggaaaaaactgtaa
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