Lactobacillus acidophilus La-14: LA14_0005
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Entry
LA14_0005 CDS
T02647
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lad
Lactobacillus acidophilus La-14
Brite
KEGG Orthology (KO) [BR:
lad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lad03032
]
LA14_0005
03400 DNA repair and recombination proteins [BR:
lad03400
]
LA14_0005
Enzymes [BR:
lad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LA14_0005
DNA replication proteins [BR:
lad03032
]
Prokaryotic type
DNA Topoisomerases
LA14_0005
DNA repair and recombination proteins [BR:
lad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LA14_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGK93242
LinkDB
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Position
4283..6247
Genome browser
AA seq
654 aa
AA seq
DB search
MADNSKENLDKIKEYEKEADKYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEVI
DNSIDERLAGFATKIEITINEDGSVTVQDDGRGIPVDIQEKTGRPALETVFTVLHAGGKF
GGGGYKVSGGLHGVGASVVNALSTKLDVTVMRDGKKYFIDFDHGRVKDEMKQVGTVPLDQ
HGTIVHFYPDPDIFTETTTFDDKILKNRIRELAFLNKGLELTFTDKRKETAETDVYKFEG
GIKEYVAFLNEGQEVLFDEPIYVESTYNGIDVEVALQYTNGYKTTLMTFANNIHTYEGGM
HEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGMTAVVSVKHPSPQFEGQTKTKL
GNSDARTAVDKSFSETFSRFLMENPSIGRKIVEKGQLAERARSAAKRAREVTRKKSGLEI
ANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR
ILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRPM
IDKGYVYIARPPLYQVRQGKVIKYLDTDEELHDYLGSLQPSPKPVVQRYKGLGEMDPEQL
WETTMNPENRRLDRVSPEYAKDADEVFELLMGNEVAPRRDFIQKNAKYVENLDA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctgataattcaaaagaaaatcttgataagattaaagaatatgaaaaagaagccgac
aaatacaacgccagtcaaattcaagttttaggcggccttgaagctgttcgtaagcggcca
ggaatgtatatcggttcgaccagttctcaaggattgcaccacttagtgtgggaagtcatt
gataacagtatcgatgaacgtctcgctggatttgccactaagattgaaattactatcaat
gaagatggcagtgtgactgttcaagatgatggtcgtggaattcctgtggatatccaagaa
aagactggtcgtccagctcttgaaactgtatttactgtgctccacgctggtggtaaattc
ggcggtggcggatataaagtttcaggtgggttgcacggggttggtgcatcggttgttaac
gcattatccacaaagcttgatgttactgttatgcgtgatggtaaaaagtactttattgat
tttgatcacggtcgcgttaaagatgaaatgaaacaagttggtacggtgccgcttgatcaa
catggaacaatcgttcacttttatccagatccagatatctttaccgaaacaaccactttt
gatgacaaaattttaaagaatagaatacgtgaattagctttcttaaacaaaggcttggag
ttaacttttacagataagcgtaaagaaactgctgaaactgatgtgtataaatttgaaggc
ggtattaaagagtatgtagcctttttaaatgaaggccaagaagtattatttgatgaacca
atttatgttgaaagtacttataacggaattgacgttgaagtggctttgcaatatacaaat
ggatacaagaccacattaatgacctttgctaacaatatccatacttatgaaggtgggatg
cacgaagctggatttaagacagctttaacacgtgtagttaatgattatgcacacaaggct
aaaattcttaaagacaaggatgacaatctttcaggtgaagatatccgtgaaggaatgact
gctgttgtttcagtaaaacaccctagtccacagtttgaaggtcaaactaagactaagtta
ggtaattcagatgcgagaactgcagttgataagtcattttctgaaacctttagtcgcttc
ttgatggaaaatccatcaattgggcgtaagattgtggaaaaaggtcaacttgctgaacgt
gctcgtagtgctgctaagcgtgcacgtgaagttacacgtaagaaatcaggtttggaaatt
gctaatttgccaggaaaacttgctgacaatacaagtaatgacccaagtatctcagagtta
ttcatagtcgaaggtaattcagccggtggatctgctaagcaaggtagatctcgtttgact
caagctatcttaccgattagaggtaaaattttgaatgtggaaaaagcttcaatggatcga
attttagctaaccaagaaattagatccttatttacggctttaggcacgggatttggtgca
gactttgatgtttcaaaagcacgttatcataagctgattattatgactgatgccgatgtc
gatggtgcccacattagaacacttcttttgacgcttttctacaattacatgcgtccaatg
attgataagggatatgtttacattgctcgtccacctctgtatcaagtgcgtcaaggtaag
gtcattaaataccttgatactgacgaagaattacatgattacttaggtagtttacaacca
agtcctaagccggtagttcaacgttacaaggggttaggtgaaatggacccagaacagctt
tgggaaactacaatgaatccagaaaatagacgtttagatcgagtaagccctgaatatgct
aaggatgcagatgaagtctttgaacttctcatgggtaatgaagttgcaccaagacgtgac
tttatccaaaagaacgcaaaatatgttgaaaacttggatgcatag
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