Lactobacillus acidophilus La-14: LA14_0411
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Entry
LA14_0411 CDS
T02647
Name
(GenBank) ATP-dependent RNA helicase YqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lad
Lactobacillus acidophilus La-14
Brite
KEGG Orthology (KO) [BR:
lad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lad03019
]
LA14_0411
03009 Ribosome biogenesis [BR:
lad03009
]
LA14_0411
Enzymes [BR:
lad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LA14_0411
Messenger RNA biogenesis [BR:
lad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LA14_0411
Ribosome biogenesis [BR:
lad03009
]
Prokaryotic type
rRNA helicases
LA14_0411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DsrH
Motif
Other DBs
NCBI-ProteinID:
AGK93634
LinkDB
All DBs
Position
391742..393103
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AA seq
453 aa
AA seq
DB search
MNNIFEDSRINPALQEGLKKINFVKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVP
IFNEIDEAAHYVQAIVTLPSRELADQLYQVARKLRDAAGMHFSIAHLAGGTDRERQLEKY
QNNTPQLVIATPGRLLDFVQKKVFAVDQVKTFVIDEADMTLDMGFLSDIDQVASKMPKDV
QIAAFSATIPVKLSNFLRKYMAHPDQIVIDNPSIIAPTIKNDLIDIGSKDRKNVLYKVLT
MGQPYLALVFANTKQKVDELTKFLQDQGLKVAKIHGGVTERERKRTLRQVEQGQYQYVVA
SDLAARGLDIDGVSLVVNYEIPRDIEFVIHRIGRTGRNGLSGHAVTLIREEEMNRIEDLE
KMGVHFDFVEIKNGELVPRKHYRSRENRQGKNRKLDTKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEIRKAKRLRKKRREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattttcgaagactcaagaattaatcctgctttgcaagaaggattgaaaaag
attaattttgttaagcctacgaaagtgcaagaaaaagttattccagcaatgttgtctgac
ttaagtgttgtagtacaagctgctactggatcaggaaagacacatgcatatttagtgcca
atttttaatgaaattgatgaagctgcacattatgtccaagcaattgttactttaccaagt
agagaacttgcagatcagctttatcaagtagcacgtaaattaagagatgctgctggtatg
catttttcaattgcacatttagcaggtggtactgatagagaacgtcaactagaaaagtat
caaaataatactccacaattggtaattgctacgccaggtcgtcttttagactttgttcaa
aagaaggtttttgctgttgatcaagtaaagacttttgttattgatgaagctgatatgaca
cttgatatgggctttttgtcggatattgatcaagtagcttcaaagatgcctaaagatgtt
caaatagctgctttttcagcaactattccagttaagttatctaactttttacgtaagtac
atggctcatcctgatcaaattgtgattgacaatccaagtataattgcgccaacaattaag
aatgacctaattgacattggctctaaggaccgtaagaatgttttgtataaagtgttaact
atgggacaaccatacttagctttagtttttgctaatactaaacaaaaggttgatgaatta
actaaatttttacaagatcaaggattaaaagtagctaagattcacggtggggtaactgaa
agagaacgaaagcgaactcttcgtcaagttgaacaaggacaatatcaatatgttgtagca
agtgatttagcggctcgtggacttgatattgacggtgtaagtttggtcgttaactatgaa
attccacgtgatattgaatttgttattcaccgtatagggagaactggccgaaatggttta
tctggtcatgctgttactttaattcgcgaagaagaaatgaatcgtattgaagatcttgaa
aagatgggtgttcattttgactttgttgaaattaaaaatggtgaactagtaccacgtaag
cactaccgtagtcgtgagaatcgtcaaggaaagaatcgtaagcttgatactaagttagtt
ggttatgttaaaaaagaaaaaagaaagcgtaaacctggctacaagaagaaaattaagcga
gcaattcaagaagataatcgtcaaaagcgtaagctcgaacaacgtcacgaaattagaaaa
gctaagcgattaagaaaaaaacgccgtgagcaaggacgttga
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