Lactobacillus acidophilus La-14: LA14_1248
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Entry
LA14_1248 CDS
T02647
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lad
Lactobacillus acidophilus La-14
Pathway
lad03410
Base excision repair
lad03430
Mismatch repair
lad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LA14_1248
03430 Mismatch repair
LA14_1248
03440 Homologous recombination
LA14_1248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lad03400
]
LA14_1248
DNA repair and recombination proteins [BR:
lad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LA14_1248
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LA14_1248
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LA14_1248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
ssDNA-exonuc_C
RecJ_OB
DHHA1
DUF5759
Tudor_FRX1
Motif
Other DBs
NCBI-ProteinID:
AGK94415
LinkDB
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Position
complement(1218059..1220332)
Genome browser
AA seq
757 aa
AA seq
DB search
MKWQKRITKELDSDLVDKYQLSSLSAQLFALRDINTDEKLDFWFNATEENLANPLLMHDM
EKAVERINQAIDNGEKITIYGDYDADGITATAIMTETLSILGADVHYFIPDRFKDGYGPN
IERYKEIVADGTKLIITVDNGVTGIDEVKYAKENGVDTIITDHHTFQEKVPDSYAVVHCN
YPGQKYPFDDYCGAGVAYTICRELMQDTMPELLDLAMIGTLGDMVKVTGEGHIIVKRGLE
ILNQTTRPGLQALIKNAGLTLGSINETDVGFNICPRLNAVGRLANANLAVELLLSDDDIA
AQKIADQIEELNNQRKELTTDVYEKCMSIIRENSWQKQNTLVLYDPEFHEGVLGLVANKI
VEKTHKPTIVLTKNDVGEVKGSGRAFNGFNLFNALNPLKDELFTKFGGHDFACGLSMQEN
KIDTLRQKLESSYQVNGESESKGYDLELPLNDLTPQTLAQINQVGPFGTGDPQPIFSISD
PTITQFYKIGKDKNHVKLTASKKGGSLAIVGFNKDFLNNNLLPFISKIFIQLTLNTYRKQ
ISLQGIIEGIEFASPKLAVPTPVIDLRNEKFVMGFADRYLLFDKKNIPIVKNRLQISDDK
ISLVKDYDQSGETVALLDVPRNQIELNEALEKNYQQIYLRFLLDQLPVEHIPAKGYFGRV
LKYIYAHPTLKPDDYRTVAPYLGLDYDSVLFILRVFFELGFVKLHDGKLIGEENPKKQPL
TSSKYLMATESQIKFVDQLRNMPTQKLITYVNNHSNN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggcaaaaaagaatcactaaagaattagattctgatttagtagataagtatcag
cttagctcgctttcggcacaattatttgctttacgtgatattaatacagatgagaagctg
gatttttggtttaacgcaacagaagaaaatttggctaatccattattgatgcatgacatg
gaaaaggcggtagaacgtattaatcaagcaattgataatggtgaaaaaattacgatatat
ggtgattatgatgctgatggaattacagctactgccattatgactgaaacactaagcatt
ttaggagcagatgtacattattttattccagatcgttttaaagacggctatggacctaat
attgaacgatataaggaaatagtagctgatggtactaagttaattattactgtagataac
ggtgtaacaggaatcgatgaagttaaatatgccaaagaaaatggtgtagatacaattatt
acggaccaccatacttttcaggaaaaagttccagattcatatgctgttgttcattgtaat
tatcctggtcagaaatatccttttgatgattattgtggtgctggagttgcctatactatt
tgccgtgaattaatgcaagatactatgccagaattacttgatttagcgatgattggtact
ctcggcgatatggttaaagttacaggcgaaggtcatatcatcgttaaacgtggtcttgag
attcttaatcaaaccactagaccagggttacaagcattaataaaaaatgcaggtttaact
ttgggttcgattaatgaaactgatgtcggttttaatatttgtccacgattgaatgccgta
ggccgcttagctaatgcaaatttggcggttgaacttttattaagtgacgatgatattgca
gcccaaaagatagctgatcaaattgaagaattaaacaatcagcgaaaagaattaactaca
gacgtatatgaaaaatgtatgtcaattatccgtgaaaatagttggcaaaaacaaaatacg
cttgtattgtatgatcctgagtttcatgaaggtgtattaggattagttgctaataaaata
gttgaaaaaacacataaacctacgattgttttgactaagaatgatgtgggggaagttaaa
ggatccggacgtgcattcaatggttttaatttatttaatgcacttaatccattgaaagat
gaattatttactaaatttggcgggcatgattttgcttgtggattatctatgcaagaaaat
aaaattgacactttgcgtcaaaaactggaatctagttatcaagtaaatggggagtcagaa
agtaaaggatacgatttggagcttcctttaaacgacttaactccacaaactttagcacaa
attaatcaggtgggcccctttggcaccggtgatcctcaaccaatttttagtatttctgat
ccaacaattacacaattttataaaattggtaaagataaaaatcatgttaagttaactgct
tctaaaaagggtggaagtttagcaatagttggttttaataaagactttttgaataataat
ttgctgccatttatctctaagatcttcatccaattgacgctaaatacttatcgaaaacaa
atatcattacagggaattatcgaaggaatagagtttgcttcacccaaattagcagtacct
acaccggttattgatttacgaaatgaaaaatttgtaatgggttttgcagatcgttattta
ctttttgacaagaaaaatattccaattgttaaaaatagactgcaaattagtgatgataaa
attagtcttgtaaaggattatgatcagtctggagaaacagtagctttacttgatgtacct
cgtaatcaaatagagctaaatgaagcacttgaaaaaaattatcagcagatttatttgcgt
tttttgttagatcaattgccagtcgaacatattccggctaaaggttatttcggcagagta
ttgaagtatatttatgctcatcctacattaaagccagatgattatcgtaccgtagcccca
tatttagggttagattatgatagtgtattatttatattgcgtgttttctttgaattaggc
tttgttaaactgcatgatggaaaattgattggggaggaaaaccctaagaagcaaccactg
acatcttcaaaatatttaatggcgactgaatcacaaattaaatttgtagatcaattaaga
aatatgccaacacaaaaattaattacatatgttaataatcattcaaataattag
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