Legionella adelaidensis: NCTC12735_00143
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Entry
NCTC12735_00143 CDS
T07063
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ladl
Legionella adelaidensis
Pathway
ladl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ladl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12735_00143 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ladl03021
]
NCTC12735_00143 (rpoC)
03400 DNA repair and recombination proteins [BR:
ladl03400
]
NCTC12735_00143 (rpoC)
Enzymes [BR:
ladl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12735_00143 (rpoC)
Transcription machinery [BR:
ladl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12735_00143 (rpoC)
DNA repair and recombination proteins [BR:
ladl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12735_00143 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF8806
Motif
Other DBs
NCBI-ProteinID:
VEH82919
UniProt:
A0A0W0R275
LinkDB
All DBs
Position
p8:complement(14770..19017)
Genome browser
AA seq
1415 aa
AA seq
DB search
MATLSNEPIRKPPVMSDLLGMLKQQGQSEEFDAIRIALASPELIRSWSYGEVKKPETINY
RTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVELALAKVRRERMGHIE
LASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFEAFVVVDPGMTELERGQLLNDEAYL
EAMEQYGDEFDARMGAEAIRDLLKQIDLDEEVQSLREELPTTNSETKIKKITKRLKLLEA
FQESGNKPEWMIMSVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLN
APDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKR
VDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFSKLEFRGLATTIKAAKKMVEREEP
VVWDILEDVIREHPILLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAYNADFDGDQM
AVHVPLTIEAQLEARSLMMSTNNILSPASGEPIIVPSQDVVLGLYYLTRERLNAKGEGKI
FSNFQEAQNFYEAGLVDIHAKVKIRMPDESGKEGQFQLVETTVGRAILADILPKEMPFST
INKVMNKKTISKVVDSCYRSFGLKETVIFADQLMYMGFKYATRAGASIGIEDMEIPEDKA
SIIEQADNEVREIESQYRSGLVTNGERYNKVIDIWSRTNEMVAKSMMAKIATEEVVDKGG
KKVRQDSFNPIFMMADSGARGSAAQIRQLAGMRGLMAAPDGSIIETPITANFREGLNVFQ
YFISTHGARKGLADTALKTANSGYLTRRLVDVAQDVVITEDDCGTEKGILMQPLIEGGDI
VEPLHERVLGRVVAMDVYVPNQNEPVVTAGTLLDEKWVEHLEKIGVDQVYVRSPITCETR
FGLCAKCYGRDLARGHLVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASRATAANNIQ
IKNKGIIRLHNIKTVTHANGNLVAVSRSGEVTIADEFGRERERYKLPYGAVLSVHDNSKV
EAGQVIANWDPHTHPVISEVSGKLKFVDLVEGVTMNRQTDDLTGLSNIVVIDAKQRGTAG
RDLKPMVKLVSDEGDDIYLAGTNVPAQYYLPVDAIINFEDGSAVGVGDVIARIPQERSKT
RDITGGLPRVADLFEARKPKDSAVMAEISGVVSFGKETKGKRRLIITASEHEAHEELIPK
WRHISVFEGEHVEKGETVAEGPPNPHDILRLLGVGALANYIVNEVQDVYRLQGVKINDKH
IETIVRQMLRKRNITFAGDSKFLIGEQIEETAMLQENDKLIAEGKMPADGTPILLGITKA
SLATESFISAASFQETTRVLTEAAVSGKLDELRGLKENVMVGRLIPAGTGYTYHQTRKAK
RAKAAGSEHATHTVTAIDVEHALSEALNADNREEH
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
ttggctactctaagcaacgaaccaattagaaaaccaccggtaatgagtgatctgctaggc
atgctcaaacaacaaggccagagtgaagagtttgatgcaatacgcattgcattggcttca
ccggaattaatccgttcttggtcttatggtgaagttaaaaagccggaaacaattaattat
cgtacatttaagccggaacgtgatggcttattctgcgctaaaatctttggtcctgttaag
gactatgaatgcttatgtggtaaatataaacgccttaaacaccgcggcgtgatatgtgaa
aagtgcggcgtagagctcgcattagctaaagtacgtcgggaacgtatggggcatattgaa
ttggccagtcctgtcgcccacatatggtttttaaaatcactaccatcccgtatcggtttg
ttattagatatgaccttgcgtgatattgagcgcgtgctttactttgaagcatttgtggtg
gttgaccctggtatgaccgaattagagcgtggtcaacttctcaatgatgaagcgtattta
gaagctatggagcagtatggcgatgagtttgatgcacgtatgggtgcagaagcaatccgc
gatttgctcaagcaaattgatcttgacgaggaagtccaatctttacgtgaagagttacct
acaacgaactccgaaactaaaattaagaaaattactaaacgtcttaaattgctggaagct
tttcaggaatctggcaataagccagagtggatgattatgagcgtattgcccgtattaccg
cctgacttacgtcccttagttcctttagacggtggtagatttgctacttctgatttgaat
gatctttaccgtcgtgtcattaaccgtaataaccgactaaaacgtttgttggatttaaat
gcccccgatattatcgtgcgtaacgaaaaacgtatgctacaagagtcggttgatgctctt
ttagacaacggtagacgaggacgtgcgattactggcactaataagcgaccattaaaatca
ttagcagatatgattaaaggtaagcaaggtcgtttccgccaaaaccttcttggtaagcgg
gtagactattctggtcgttctgtaattgtggtagggccaaccttacgtctgcatcaatgc
ggattgcctaaaaaaatggcgcttgagctatttaagccttttatattttctaaattagag
tttaggggcttagcgactactattaaagctgctaaaaaaatggtagagcgtgaagagccg
gtagtttgggatattttagaagatgttattcgcgagcaccctattcttctaaaccgcgcg
cctacactacaccgtttgggtattcaagcatttgaacctgtattaattgaaggtaaagcg
attcaattacatccgttagtgtgtacagcatacaatgccgacttcgacggggaccaaatg
gcggtacacgtaccattaactatcgaagcgcagttagaagcccgctcattaatgatgtcc
actaataatatcttatctcccgcgagtggtgagccgattattgttcctagccaggacgtg
gttttagggttgtactacttaacacgcgagcggctaaacgctaaaggtgaaggcaaaata
ttttcaaacttccaggaagctcagaatttttatgaagcaggccttgtagatattcatgca
aaagtaaaaattcgtatgcctgatgaaagtggaaaagaaggacagtttcagctggtagaa
acaacggtaggccgggctattttggccgatatattgcctaaagagatgccattttcaacc
atcaataaagtaatgaataagaaaactatctccaaagtggtagatagctgttatcggagc
tttgggttgaaagaaacggttatctttgcggatcaattaatgtatatgggtttcaaatat
gcaacccgcgccggagcttcgatcggaattgaagatatggaaattcctgaagacaaggca
agcattattgagcaggcagataatgaagttcgtgagatcgaatcgcaataccgttctggt
cttgtaacgaatggtgagcgctacaataaagtaattgatatttggtcacgtacaaacgaa
atggtggccaagtcgatgatggcaaaaatcgctacggaagaagtggtcgataaaggcggc
aaaaaagtacgccaagattcattcaatcctattttcatgatggccgactcaggtgctaga
ggctctgctgctcagattagacagcttgcaggtatgcggggattgatggcagcgccagat
ggttcgattattgaaactcctattacggcgaacttccgcgaaggtctcaatgtattccaa
tactttatttctactcacggagcacgtaaaggtttggccgataccgcattgaaaactgct
aactccgggtatttaactcgaagattagtagacgtagcgcaggacgttgttattactgaa
gatgattgcggcacggagaaaggcattctcatgcagccattaattgaaggtggcgacatt
gtagagccattgcatgagagagtattaggccgtgttgttgctatggatgtatatgttcct
aatcaaaatgaacccgtagttacggcagggaccttattagacgaaaaatgggttgaacat
ttagaaaagattggtgtggatcaagtatatgttcgctcaccaattacttgcgaaacccgt
tttggtttatgtgccaagtgttatggtcgtgatttagcacgcgggcatctcgttaatacc
ggtgaagcagtaggtattatcgctgctcagtcaattggggagccaggtacacagttaact
atgcgtaccttccatatcggaggagctgcatcacgagcaactgctgcaaataatattcaa
ataaagaacaagggtattattcgcttacacaatattaaaacagttacacacgcaaatggt
aatttggtggccgtgtcccgttcaggagaagtaacgattgctgatgaatttggacgtgaa
cgtgagcgctataaattaccgtatggcgcggtattgtcagtccacgacaactccaaagtt
gaagcgggtcaagtaatcgccaattgggatccacatactcaccctgtaatatcagaagtg
agcggtaaattgaaatttgtggatttggttgaaggcgttaccatgaatcgtcaaactgac
gatttaaccggcttaagtaacatcgtggttattgatgctaaacaacgcggtacagcgggt
cgtgacttaaaaccaatggttaagttggtatcagatgaaggtgatgatatatatctcgcc
ggtaccaatgtgccagcgcaatactacctacctgtagatgctatcatcaattttgaagat
ggtagtgctgtaggcgttggggatgtaattgctcgtattccacaagagcgttcgaaaaca
agagatattaccgggggtcttccacgcgttgctgatttgtttgaagcaagaaaaccaaaa
gattctgcagttatggcagaaatctctggggtagtgagctttggaaaagaaacaaaaggg
aagcgacgtttaattattactgcttcagagcacgaagcacacgaagaattgataccaaaa
tggcgtcatatttctgtgtttgaaggtgagcatgtagaaaaaggggaaacggtagccgag
gggccacctaatccacatgatattctacgtctcttgggcgtgggtgcattagcaaattat
attgttaatgaagtccaagatgtatatcgcttgcaaggggtaaaaattaacgacaaacac
attgaaaccatcgttcgtcaaatgttacgcaagagaaatattacctttgctggagactct
aagttcttaataggagaacaaatagaagaaacggcaatgttacaagaaaatgataaactg
attgctgaaggaaaaatgccagctgatggtacgccaatcttactgggtatcaccaaagct
tcattagcaacagaatcatttatttctgccgcctcattccaagaaaccacccgcgttctt
accgaagcagcagtaagtggaaaattagatgagttacgtggtctaaaagaaaacgttatg
gtaggaagattgataccagccggaactgggtatacgtatcatcaaacacgtaaagctaag
cgtgcaaaagcagctggaagtgagcatgctacgcacacagtaaccgcaattgatgttgag
catgctttaagcgaagcattgaatgcagataatagagaagagcattaa
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