Legionella adelaidensis: NCTC12735_00406
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Entry
NCTC12735_00406 CDS
T07063
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ladl
Legionella adelaidensis
Pathway
ladl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ladl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12735_00406 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ladl03019
]
NCTC12735_00406 (deaD)
03009 Ribosome biogenesis [BR:
ladl03009
]
NCTC12735_00406 (deaD)
Enzymes [BR:
ladl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12735_00406 (deaD)
Messenger RNA biogenesis [BR:
ladl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12735_00406 (deaD)
Ribosome biogenesis [BR:
ladl03009
]
Prokaryotic type
rRNA helicases
NCTC12735_00406 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
PRAI
adh_short
NMT1_2
AAA_19
zf-CRD
Motif
Other DBs
NCBI-ProteinID:
VEH84787
UniProt:
A0A0W0R2U0
LinkDB
All DBs
Position
p9:complement(196794..198455)
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AA seq
553 aa
AA seq
DB search
MTQATPSFASLGLSPPLLKAIEELNYQTPSPIQQQTIPWLLQGRDVIGQAQTGTGKTAAF
ALPILQRLQVAVKETQALILAPTRELAIQVAESFSSLSTKQAGIKVVVLCGGQDYRPQLK
QLREGAQIVVGTPGRILDHLDRGTLQLGNLNTFVLDEADEMLRMGFIEDVETILAKLPET
KQMALFSATMPSRIRQIANCYLNDPVSIEIKSATATVKSIEQRFLFANQMQKPDALLRVL
ASEDFQGVIVFVRTKSSTEEVAELLQQYDHKAMAIHGDLSQALRERIIAQFKQGTIDILV
ATDVAARGLDVDRVTHVINYDIAQDCETYVHRIGRTGRAGRSGVTILFVTPRESRMLSLI
ERHTRQRIEKINVPHDQAILAAKHKRFINNITTRLDNENLKEYQQIIENFLKENEVSAVE
VAAALALKLNSDKGWKNSISLPQVKQEKVKIKNGKSEGKNPRFGERDRKRSKVEDYAHEV
FRLDVGRIHGVKPGNIVGAIANEAGIQSRYITGLKINDDHSIVKLPKGMSKEIFQDLNKA
WVCGRQLKLVSLG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagctacaccttccttcgcttctttgggcttatctccccctttattaaaagct
attgaggaattaaattatcaaacgccctcacctattcaacaacaaaccattccctggctt
ttgcaaggtcgagacgtaattggacaagcacaaacaggtactggtaaaacagctgccttt
gctttacctattttgcaacggttgcaagtggcggttaaagaaacccaagcgcttattctt
gcgcctaccagagaattagctattcaagttgccgagagtttttcttcattaagtacaaaa
caagcggggataaaggtagttgttctttgtgggggacaagattaccgtcctcaattgaag
caattgcgagaaggggcgcaaattgttgttggaacaccgggaaggattcttgaccacctt
gatcgaggtaccttgcaattaggcaaccttaatacatttgttttagatgaagcagatgaa
atgttgcgaatgggttttattgaagatgtagaaacgatattggcaaaactcccagagact
aagcaaatggctttgttctccgctaccatgcccagtcgaatacgacaaattgctaattgc
tatttaaatgatcctgtttctattgaaattaaatcagcaactgctacggtaaaatcaatt
gagcaacgttttttatttgcgaatcaaatgcaaaaaccagacgctttattgcgtgtgtta
gcaagcgaagattttcaaggagttattgtttttgtacgtactaaaagcagtacagaagaa
gtagccgaactgttacagcagtatgatcataaagcaatggcaatccatggggatttaagc
caggctttacgcgaacgtattattgcgcaatttaaacaaggtactattgatatcttggtt
gctactgatgtagctgccagaggcctggatgtagatcgcgtgacgcatgttatcaattat
gatatcgcacaagattgtgaaacgtatgttcatcgaattggccgaacaggtcgtgcagga
agaagcggagtaacaattttatttgttacgccgagagaatcacgcatgctcagtttaatc
gaaagacatactcgtcaacgtattgaaaaaattaatgttccacacgatcaggctatttta
gccgctaaacacaaacgttttattaataatattaccactcgtttagacaatgaaaatttg
aaagagtaccaacaaattattgaaaattttcttaaagaaaacgaggtctccgctgtcgaa
gtagcggcagccttggctctaaaattaaatagtgataaaggttggaagaactccatttct
ttaccccaggttaaacaagaaaaagtaaaaataaaaaatggtaaatcagaaggaaagaat
ccacggtttggcgaacgagaccgaaaaagaagtaaagtagaagactatgcccatgaagtc
tttcgactagacgtgggaagaattcatggtgttaagccgggtaatatcgtaggggccatc
gctaacgaagcgggcatccaaagccgttatatcactggtttaaaaattaatgatgaccat
tctattgtaaaattgcctaaagggatgtccaaagaaattttccaagatctaaataaagct
tgggtttgtggtagacaattaaaactggtttccttgggttaa
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