Lactobacillus acetotolerans: LBAT_0349
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Entry
LBAT_0349 CDS
T03976
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lae
Lactobacillus acetotolerans
Pathway
lae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBAT_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lae03021
]
LBAT_0349
03400 DNA repair and recombination proteins [BR:
lae03400
]
LBAT_0349
Enzymes [BR:
lae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBAT_0349
Transcription machinery [BR:
lae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBAT_0349
DNA repair and recombination proteins [BR:
lae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBAT_0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF4403
Motif
Other DBs
NCBI-ProteinID:
BAQ56738
UniProt:
A0A0D6A1P5
LinkDB
All DBs
Position
355675..359337
Genome browser
AA seq
1220 aa
AA seq
DB search
MIDVNKFESMQIGLASPNKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWSC
ACGKYKGVRYRGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLILDM
SPRLLEGVIYFAAYIVIDPGDTDLEFKQLLTEAEYREQKAKYGKRFIAKMGAEAIRDLLK
KVDLAKEVADLKKKLKNATGQKRTRAIRRLDILDAFKDSGNKPEWMVIDAVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVSPKLKFYQCGVPRP
MALELFKPFVMHELVKRGIASNIKNAKRKIDRQDDDIWDVLEDVIKERPVLLNRAPTLHR
LSIQAFEPILVPGKSIRLHPLVCEAYNADFDGDQMAIHVPLSDEAVAESRMLMLAAHHIL
APKDGKPIVTPSQDIVLGNYWLTQAERGREGMIFDSPAEATVAYENGDIHYHTIIGMSAD
SMPKKPWPKGREHGIFITTYGKVEFNQIFPEDYFYVNEPTEKNLNNPLDAKYFLGEGEDI
HKKIDDVSDDLLSTPFKKSFLSDSIATIYKYYKVQRTSEYLDDLKKLGYTSSTTSGITIG
MTDVPEIKDKDAKVAKAHKQVDVVSKQFRRGLITEQERHDRVISIWNDCKDQVQNEIANI
YDPRNPITIMADSGARGNISNFTQLAGMRGLMATPNGGLFEIPVTSNFKEGLSVLELFMS
THGARKGMTDTALKTAQSGYLTRRLVDVAQDVIIRDDDCGTDRGITVHAIKEGDEMIEPL
YDRLLGRFTAETVKDPKTGETIVTPNVMMDEKLARKICDAGVTHVKIRSILTCDTPHGVC
RKCYGMNLATSEEVEVGEAVGTVAAQSIGEPGTQLTLRTFHNGGVAGAEDITQGLPRVQE
LFEARNPKGRAIISEVDGVIDSIQENPAEHTREITVKGKIETRSYDVPYTASVAVAEGDT
VHRGDKLTLGSIDPKELIQVTDTLTTEEYILAEVQKAYRMQGVDIADKHVEVLTRQMLQK
VRVLDPGETDMLPGEVLDIGQFKDRNTSVINSGGIPATAQSVILGITKAALETNSFLSAA
SFQETTRVLTDASIRGKNDPLLGLKENVIIGKIIPAGTGLPVYRDMEPEADVKKPKSVYS
IADIEKKMKEADKAKKKPQN
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgtaaataagtttgaaagcatgcaaattggacttgcatcaccaaacaaaatc
agaagctggtcatacggtgaagttaaaaagccagaaactattaattaccgtactttaaaa
ccagaaaaagatggtttatttgatgaaagaatctttggtccaaccaaagactggtcttgt
gcatgtggtaaatataaaggtgttagatatcgtggcatcgtatgtgaccgttgtggtgtt
gaagttacttcttcaaaagtaagaagagaacggatgggccatattgaattagccgcacct
gttacacatatttggtacttcaaaggtattccatcacggatgggcctgattttggatatg
tcaccaagacttcttgaaggagttatctattttgctgcatatatcgtaattgatccaggg
gatactgaccttgaatttaagcaattacttaccgaagcagaataccgtgagcaaaaagcc
aagtacggtaaacgttttatagccaagatgggtgctgaagctattcgtgatcttttaaag
aaagtggacttagctaaagaagttgctgatttaaagaaaaagcttaagaatgcaactggg
cagaaacgtactcgtgccattagaagactcgatattttagatgcctttaaagattctggt
aataagccagaatggatggttattgatgcagttccagttatcccaccagacttacgtccg
atggttcaattggaaggtggtcgtttcgccacttccgatctaaacgatttatatagacgg
gtaattaaccgtaacaatcgtttaaagagattacttgatttaaatgcaccaaatattatt
gttcaaaatgaaaagcgaatgctgcaagaagctgtcgatgccttaattgataacggtcgt
cgtggtcgtccagtaaccggcccaggtaaccgtccacttaaatcactctcacacttactt
aaaggtaagcaaggtcgtttccgtcaaaacttacttggtaagcgtgttgactattcaggt
cgttcagttatcgatgtttcaccaaaattgaaattctatcaatgtggtgttcctcgtcca
atggcccttgaattattcaagccattcgtaatgcacgaattagttaaacgaggcattgct
tctaatattaagaatgctaagcgtaagattgatcgtcaagatgatgacatttgggatgta
cttgaagacgtcattaaagaacgtccggttcttttaaaccgtgcacctactcttcaccgt
ttgagtattcaagcctttgaaccaattttggtaccaggtaaatctattcgtttacaccca
ttagtttgtgaagcatataatgccgacttcgatggtgaccagatggctattcacgttcct
ttgtctgatgaagctgttgctgaatcacgtatgttgatgttagcagctcaccatatcttg
gctcctaaagatgggaaaccaatcgttactccatcacaggatatcgttttgggtaactac
tggttaactcaagctgagcgtggtcgtgaaggtatgatctttgattcaccagcagaagca
actgttgcttatgaaaatggtgacattcattaccatactattatcggaatgtctgctgat
tcaatgccgaagaaaccttggcctaagggtcgtgaacacggtatttttatcactacttat
ggcaaggttgaatttaaccaaattttccctgaagattacttctatgttaacgaaccaact
gagaagaatttaaataatccattagatgctaaatacttcttgggtgagggagaagacatt
cataagaagattgatgatgtcagcgatgacctactttctactccatttaagaagagtttc
ttatctgattctattgctactatttataagtactataaggttcaaagaacttcagaatat
ttggatgatttgaagaagttaggttacacaagttcaacaacttctggtattactatcggt
atgaccgatgttcctgaaattaaggataaggatgccaaagtagccaaggcccacaaacaa
gttgatgttgtttctaaacaatttagacgtggtttgattactgagcaagaacggcacgat
cgtgtaattagtatttggaatgattgtaaagaccaagttcaaaacgaaattgctaatatt
tatgatccacgtaacccaattactatcatggccgattctggtgcccgtggtaacatttct
aactttactcagttagccggtatgcgtggcttaatggctacccctaacggtggattgttc
gaaattcctgttacttcaaactttaaagaaggtttgtcagttctagaattgttcatgtct
actcacggtgcccgtaaaggtatgacggataccgctttgaagactgctcagtctggttac
ttaactcgtcgtttagttgatgtagctcaggatgttattatccgtgacgatgactgtggt
actgatcgtggtattacagttcatgcaatcaaggaaggcgacgaaatgatcgagcctttg
tatgatagactacttggtcgtttcacagctgagacagttaaggatccaaagacaggagaa
actattgttactcctaacgtcatgatggatgaaaagttagctcgtaagatttgtgatgcg
ggtgttactcatgttaagatccgttcaattcttacttgtgatacaccacacggtgtttgt
cgtaagtgttatggtatgaaccttgcaacgagtgaagaagttgaagtcggtgaagcagtt
ggtactgttgcagcccaatcaatcggtgaacctggtacgcagcttactttgagaactttc
cacaacggtggtgttgccggtgctgaagatattactcaaggtttacctcgtgtacaggaa
ttgtttgaagctcgtaaccctaaaggtcgcgctataatttctgaagttgatggtgtcatt
gattcaattcaagaaaacccagcggaacatacgcgtgaaattaccgtaaagggcaagatc
gagacgagaagttacgatgttccttacactgcatcagttgcagttgctgagggtgatact
gttcaccgtggggataagttgaccttaggttcaattgatccgaaggaattaattcaagta
accgatactttaacgactgaagaatatattttagctgaagttcaaaaagcatatagaatg
caaggtgtagatattgccgacaagcacgtcgaggtattgacccggcaaatgctgcaaaag
gtacgtgtacttgatccaggtgaaaccgatatgttgccaggtgaagttttggatattggt
caatttaaagaccgtaatacctcagttattaattctggtggtattcctgctactgctcaa
agtgtcattttgggtattaccaaagcagctttggaaaccaatagtttcttatctgctgct
tcattccaggaaactactagggttcttactgatgcttcaattcgtggcaagaacgatccg
ttacttggacttaaggaaaacgttattattggtaagatcattccagctggtactggtttg
cctgtttaccgtgatatggaacctgaggctgatgtcaagaagcctaaatctgtctactca
attgctgatattgagaagaagatgaaggaagctgacaaggctaaaaagaagccacaaaat
tag
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integrated database retrieval system
