Lactobacillus acetotolerans: LBAT_0466
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Entry
LBAT_0466 CDS
T03976
Name
(GenBank) truncated RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lae
Lactobacillus acetotolerans
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lae03019
]
LBAT_0466
03009 Ribosome biogenesis [BR:
lae03009
]
LBAT_0466
Enzymes [BR:
lae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBAT_0466
Messenger RNA biogenesis [BR:
lae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBAT_0466
Ribosome biogenesis [BR:
lae03009
]
Prokaryotic type
rRNA helicases
LBAT_0466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAQ56855
UniProt:
A0A0D6A2W0
LinkDB
All DBs
Position
452370..453452
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AA seq
360 aa
AA seq
DB search
MRDASGLNISIAHFAGGTDRERQLKKLENRKPQLVIATPGRLYDFVQKKNFAIDHVKAFI
IDEADMTLDMGFLENIDYVAKRLPKDTLFAAFSATIPVKLSNFLRKYMDHPEQIVIGSKT
IIAPTIKNDLIDIGSKNRKKILYQLLTMGQPYLALVFANTKQKVDELTEFLQNQGMKVAK
IHGGITERQRKRTLREVENGQFQYVVATDLAARGLDINGVSLVINYEIPRDLEFVIHRIG
RTGRNGLSGHAVTLIREEEMDRIEELEKMGLHFDFVEIKNGELVPRKHYHRRNNRKAKNH
KIDTKLNGYVKKEKRKRKPGYKKKIKRAIQEDKMQKRKLEQRHEVRKAKRLRKRRRDRGR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggatgcctctggtttgaatatttcaattgcacactttgcaggcggaactgaccgt
gagcggcaattaaaaaagcttgaaaatcggaagccacagctagtaattgctacaccagga
cgtttgtatgatttcgtccaaaagaaaaattttgcgattgatcatgtaaaagcttttatt
attgatgaagccgacatgactttagatatgggattcctggaaaatattgattacgttgcc
aaacggctgcctaaagacaccttgtttgctgcattctcagctacaattccggttaaatta
tccaattttttgcggaagtatatggatcatcctgagcaaattgtgattggcagtaaaacc
attattgcaccaacgattaagaatgatttaattgacattggttcaaaaaatcgtaagaaa
attctttatcaattattaacgatgggccaaccgtatttagcgttagtgtttgctaatact
aagcaaaaagttgatgagttaactgaatttttgcaaaatcaaggcatgaaggttgctaaa
attcatggtggcatcacggagcggcaacgtaaacgtacgttgcgtgaagttgaaaacgga
caatttcaatacgtagttgcgacggacttagcggctcgtggtcttgatattaacggggtc
agtctagttattaactatgaaattcctcgtgaccttgaatttgttattcaccgaattggc
cgaaccggtcgaaatggcttatctggtcatgccgttactttgattcgggaagaagagatg
gaccggattgaagaactcgaaaagatgggccttcactttgattttgttgaaattaaaaat
ggtgaactggttccgcgcaagcactatcacaggcgcaataaccgcaaggccaaaaatcat
aagattgacactaagcttaatggttacgtcaaaaaagaaaaacgcaagcgtaagcctggc
tataagaagaagattaagcgggctattcaagaagataaaatgcagaagcgtaaacttgaa
cagcggcatgaagttcgtaaagctaaacgtttgcgtaagcgtcggcgcgatcgtggacgt
tga
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