Lactobacillus acetotolerans: LBAT_0716
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Entry
LBAT_0716 CDS
T03976
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lae
Lactobacillus acetotolerans
Pathway
lae03410
Base excision repair
lae03430
Mismatch repair
lae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBAT_0716
03430 Mismatch repair
LBAT_0716
03440 Homologous recombination
LBAT_0716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lae03400
]
LBAT_0716
DNA repair and recombination proteins [BR:
lae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LBAT_0716
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBAT_0716
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LBAT_0716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAQ57105
UniProt:
A0A0D6A3K3
LinkDB
All DBs
Position
712956..715226
Genome browser
AA seq
756 aa
AA seq
DB search
MKWKQRTAEELDPKLIDKYQLSPIAAKLFSLRGINTDEKLNFWFNATEDDLADPSLMHDM
DKAVKRINQAIDKGEKITVYGDYDADGITSTTIMTETLSILGADVHYFIPSRFKDGYGPN
LERYKQIVADGTKLIITVDNGVTGIDEVAYAKDKGVDTIVTDHHTIQDKLPDAYAIVHCN
YPGQKYPFDDYCGAGIAYTICRSLMQDPMPELLDLAMIGTIGDMVKVSGEGHIIVKRGLE
VLNQTDRPGLRALIKNASLTMGSINETDIGFNIAPRLNAVGRLADANLAVELLLSDDDVE
AQKLADQVEKLNEKRKKLTTKVYNACLKQVKKNSWQRKNTLVLYDPSFHEGVLGLVANKI
VEKLHKPTVILTKNSVGEIKGSGRSIPGFNLFDALNPLKEKLLTKFGGHDFACGLSMTED
KINALRDAFEKSFHVKGGLETKYYDMELPMKGLAPSTIAEVNQAGPFGTDNAQPIFSISD
PQITDFRKIGKDKTHVKFNAVKGDGKLDVVGFNKAFLNNNLLPFVSKIFVQLSLNTYRNK
VSLQGIMEGVSFAAPKLAVPTQVIDMRSESYVMGFADRYLLFDPKNIATVKNGLGIDEDK
ISLAKDYNANGETAVLLDVPHNQIDLDNALENNYQQLYLRFLLDQLPVEKIPDKSYFGKV
LKYIYAHPTLKPEDYRTVAPYLGLNYDSILFILRVFFELGFVQLDNDKLVGKKDPEKKPL
TASKYLLATQSQIKFVRELRNMPSQQLLAYVNNFIK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggaaacaaagaactgcggaagagttagatcctaaattaattgataagtatcaa
cttagcccaattgcggctaagttgttttctttgcgcgggattaatacggatgaaaagtta
aatttttggtttaatgcaactgaagatgatttggcagatccatcacttatgcatgatatg
gataaagcggttaagcggattaatcaggcaattgataagggtgaaaagatcactgtctat
ggtgattacgatgcggatggaataacttctacaacgatcatgacggagaccctgagtatt
cttggggccgatgtccattacttcataccgagccgttttaaagatggttatggacctaat
ctagaacgttataagcaaattgttgccgatggtaccaaattaattattacggttgacaat
ggggttaccgggatcgatgaggtagcttatgctaaagataagggtgtcgacacgattgtt
accgatcaccacactattcaagataaattgcctgacgcttatgcgattgttcactgtaat
tatcctggtcaaaagtacccctttgatgattactgtggtgcagggattgcttacaccatt
tgtcgtagtttaatgcaggatcctatgccggaactcctagatttggcaatgattggtacc
attggcgatatggtaaaagtatctggtgaaggtcacataattgttaagcggggtctagag
gtacttaatcagactgaccgtccaggtttgcgtgctttaattaaaaatgccagcttgact
atgggcagcattaatgaaactgatattggttttaatattgctccacggttaaatgccgtt
ggccgtttagcagacgctaatttagcggttgagttgctgcttagtgatgatgacgttgag
gcgcaaaaattagctgatcaggttgaaaaattaaatgagaagcgtaagaaattaactact
aaagtctataatgcttgtttgaagcaagttaagaaaaatagttggcaacgtaaaaataca
ttggtactttatgatccatcttttcatgaaggtgtgttaggtctagtagcaaataaaata
gttgaaaagttgcacaagccaacggttattttgactaaaaattctgttggtgaaataaag
ggttctggccgttcaattcctggctttaacctatttgatgcattaaatccgcttaaagaa
aaattgttgactaagtttggtggtcatgattttgcttgtggtttgtcgatgactgaagat
aagatcaatgctttaagggatgcctttgaaaagagttttcacgttaagggcggtctagaa
actaagtattatgatatggaactaccgatgaagggattagctcctagtacaatagcagaa
gtgaaccaagcaggtccttttggtaccgataatgctcagcccattttcagtatttctgat
ccgcagattacagattttcgtaagattggtaaagataaaacacacgttaagtttaatgcg
gttaaaggtgacggcaagcttgatgttgttggttttaataaagcattcttaaacaataac
ttgttaccctttgtttcgaaaatctttgttcagctatctttaaatacttaccgcaacaag
gtttccttacaagggatcatggaaggcgtatcttttgctgcacctaagttggctgtacca
acccaagtaattgatatgcgttcagagagttacgtaatgggttttgctgacaggtattta
ttgtttgatccgaagaatattgcaactgttaaaaatggtttaggtatcgatgaagataag
attagcttagcaaaagattataatgcaaatggtgaaacggcggttttgcttgatgtgccg
cacaatcagattgatctagataatgcgctagaaaacaattatcagcaattatatttacgc
tttttgcttgatcaattaccagttgaaaagattccggataaatcttactttggcaaagtt
ttgaagtatatttatgcgcatcctactttaaaacccgaggattatcgcacagtggctcca
tatctgggcttaaattatgatagtattttgtttattttaagagttttcttcgaattagga
tttgtgcaacttgataacgataaattggttggaaagaaagatcctgaaaagaagccactc
acggcttctaaatatttgttggctacacagtcacaaataaagtttgttcgggaattgcgt
aatatgccaagtcaacaattattggcatatgttaataatttcatcaaataa
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