Lactobacillus acetotolerans: LBAT_0986
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Entry
LBAT_0986 CDS
T03976
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lae
Lactobacillus acetotolerans
Pathway
lae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LBAT_0986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lae03019
]
LBAT_0986
Messenger RNA biogenesis [BR:
lae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBAT_0986
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4755
DUF2017
Motif
Other DBs
NCBI-ProteinID:
BAQ57375
UniProt:
A0A0D6A4I3
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Position
complement(1022174..1023874)
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AA seq
566 aa
AA seq
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MADQIKIMILSGVREQGKDMFAVQVNDEIFVLDAGLKYPDSSLFGIDVVIPDLDFFAQYG
DRVVGIFLTHGHADSIGALPYILRKYDIPVFGSKLTIELAKITVKRENKHCKNSLFHVID
ADTEIDFKNANISFFHTTHSIPESLGIDVHTPAGEVVYTGDFKFDPSAAPHYRTDMDRLA
EIEEKGVLALLSDSSNAESSFPNASEQDIGEYVTSVFRNATGRIIVASKASNLNRVQEVL
NAADATGKRVLLTGRDVGKIVRTAMKLGYLKVPKGLLMRVKDLKNTPDNKTVILETGQMG
EPLNSLQKMAKKRHSMITIHKGDLVFIVTTPSHAVETMVAQTSDMVYRAGGTVIQLGKDK
HTSGHATGRDLQLLIDTIKPKFLIPVIGEYRLLEVHKDLAIKAGIKKDNIFITKNGDCLD
YDFKKKRFYLSDPVPGEDTMIDGSGVGDVGNIVLRDREVLSDDGIFIAVVTIDRKKKKII
SEPQVTSRGFVYIKANHQLMRDSIEVIKKAINNNFEHKKFDWTELKKDVRNDLEKFLYKK
TNRRPVVLPVVMEVNQNRHRAMQKTQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaattaaaattatgattttgagcggcgtacgtgaacaaggaaaagatatg
ttcgcagttcaagtcaacgatgaaatttttgtccttgatgctgggctgaaatatccagat
agttctttgtttggaatcgatgttgttatccctgacctcgatttctttgcacagtacggt
gaccgtgtagttgggatctttttaacgcatgggcatgcggattcaattggggctttacca
tatattttacgtaaatatgatattccggtatttggttcaaaacttactattgagctcgca
aagattacggtaaaacgtgaaaataaacattgtaagaacagtctcttccacgttattgac
gcagatactgagattgattttaagaatgcgaatatctcattcttccatacaacccactca
attccagaatcattaggaattgatgtgcatacaccagccggtgaggtagtttacaccggt
gactttaagtttgatccatctgctgctccgcattatcgtacagacatggatcgtttagca
gaaattgaagaaaagggtgtattagccctccttagtgattcatctaatgctgaatcttca
tttccaaatgcttcagagcaggatattggtgagtatgtaaccagtgtctttagaaatgca
accggaagaattattgttgcttcaaaggcttctaatttgaatagggtgcaggaagtttta
aacgcggctgatgcaaccggcaaacgggttcttttaacagggcgagacgtcggcaagata
gttcggactgcgatgaaattaggttacctaaaggtacctaaaggactgttaatgcgggtt
aaggacttaaagaataccccagataataagactgtgattttagagaccggtcagatgggt
gagcccttaaattcgctgcaaaagatggctaagaagcgccacagtatgattactattcat
aagggtgatttggtctttattgtaaccactccgtctcatgccgttgaaacaatggttgcc
caaaccagtgatatggtttatcgcgcaggcggtaccgtaattcaactgggtaaagataaa
catactagtggtcatgcaaccggtcgtgatttacaacttttaattgatacaattaaacct
aaattcttgatcccagtaattggtgaataccgtttgcttgaagttcataaggatttggca
attaaggccgggataaagaaagacaatatctttattaccaagaacggggattgcttagat
tatgatttcaagaagaagcgattctacttatctgaccccgttcctggagaagatacaatg
atcgatggctccggtgttggtgacgttggtaacattgttttgcgtgatcgggaagttctg
tctgatgacggtatcttcattgctgttgtgactattgacagaaagaaaaagaagattatc
tctgagccgcaggttacgagtcgtggtttcgtctacattaaggctaaccaccaattaatg
cgtgattcaattgaagtaattaaaaaagccattaataataactttgaacacaagaagttc
gattggaccgagcttaagaaggatgttagaaatgatctagagaagtttctctacaagaag
accaatcggcgtccggttgtattgccagttgtgatggaagtcaaccaaaaccgtcaccgt
gcaatgcaaaaaacgcaataa
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