Lactobacillus acetotolerans: LBAT_1149
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Entry
LBAT_1149 CDS
T03976
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lae
Lactobacillus acetotolerans
Pathway
lae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LBAT_1149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lae03400
]
LBAT_1149
DNA repair and recombination proteins [BR:
lae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LBAT_1149
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LBAT_1149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND3
RsgA_GTPase
AAA_29
nSTAND1
AAA_22
AAA_23
AAA_21
AAA_33
DnaJ_CXXCXGXG
AAA_18
APS_kinase
AAA_15
AAA_14
ATPase_2
SLFN-g3_helicase
nSTAND6
AAA_24
NACHT
Viral_helicase1
cobW
RNA_helicase
Mtrc-MtrF_II-IV_dom
NTPase_1
T2SSE
DUF1924
MMR_HSR1
PRK
Septin
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAQ57538
UniProt:
A0A0D6A3Z3
LinkDB
All DBs
Position
complement(1180040..1182898)
Genome browser
AA seq
952 aa
AA seq
DB search
MANDKIVIRGAREHNLKDINLTIPKDKMVVITGLSGSGKSSLAFDTLYAEGRRRYVQSLS
SYARQFLGQMDKPDVDSIEGLNPAISIDQKTTSHNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTLIERQSVDQMVDRIMKLPERTKIQLLAPVVRSKRGAHKEVFKRVQRAGYVRVI
VDGKMHEIGEKFSLEKNKRHTIDIVVDRLIVKKSIRSRLFDSVEAALRLSDGYMNVDVIG
GQTLNFSEYYACPKCGFTVGEMEPRLFSFNAPFGACPDCDGLGVKLSVDEDLVIPDKSKT
LAEGAVALWKNSKYYGGMLKQACAALKIPMDKPYKKLTKRQRNIILHGSDKVIKFNVTGD
FGVNDTTKPFEGVMDNVERRYRRPMSKFMRDIMRKYMTELTCSTCHGKRLNEKALAVKVM
GKDIAEASDLSIDKALKFFKSVKLDKQGTMIAKPILKEVCDRLTFLNNVGLDYLTLSRSA
NTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIASLKKMRDLGNSLIVV
EHDEETMRQADYIVDMGPGAGAYGGKVMAVGTPKEIEKNPKSLTGQYLSGKKFVPVPLKR
RKGNGKKITITGAAENNLKNIKVDFPLGKFIVVTGVSGSGKSTLVNMILKRALAQKLNNN
SIKPGKYKSIRGYNNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRTLFAQTNEAKLRGY
TKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCKVCHGTRYNSETLEVTYRKKNIA
QVLDMTISEACKFFKNIPKIARKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAAELQK
LSTGKNFYILDEPTTGLHTDDIKRLLEVLQRLVDEGNTVLIIEHNLDIIKNADWLIDLGP
EGGDGGGTVVATGTPEHVAQVKESYTGQYLKPVLERDTRLTKEAQKQKSKAK
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgataaaattgtgattcgtggtgcacgagagcataacttaaaagatattaat
ttaactattccaaaagataaaatggttgttataactggtttgtctggttctggcaaaagt
tctctagcttttgataccctttatgctgaaggacgcagacgttacgttcaatcattgtct
tcttatgctagacaatttttggggcaaatggataagccagatgttgattcaatcgaaggc
ttaaatccagctatctcaattgaccaaaagacaacgtcacataacccacgatcaactgtt
ggaactgttacagaaattaatgattatttacgtttactttgggctagagtaggtcaccct
atctgtccaaatgatggcaccttaattgaacgtcagtcggtcgatcaaatggttgatcgg
atcatgaaattacctgaaagaactaagattcaacttttagcaccagttgttcgatcgaaa
cgtggtgcacacaaagaagtgttcaaacgagttcaacgggcaggttatgtcagggtaatc
gttgacggtaaaatgcatgaaattggtgagaaatttagtctagagaaaaataagcgtcat
accattgatattgttgttgataggttgattgtcaaaaaaagtatccgttcacgtcttttt
gattccgttgaagcagcattacgtctgtccgatgggtatatgaacgttgacgttattggt
ggccaaacacttaatttctctgagtactatgcttgtcctaaatgtgggtttactgttggc
gagatggaaccaaggctgttttcatttaatgctccttttggtgcctgtccggattgtgat
ggcttaggtgttaagctttctgtcgatgaggatttggttattcctgataaaagtaagact
ttggcagaaggtgctgtagcactttggaagaattcgaagtactacggtggcatgcttaag
caggcctgtgccgcacttaaaattccaatggataagccatataagaaacttactaagcga
caaagaaatattattttacatgggtcagataaagtcattaaatttaatgttactggtgac
tttggtgtaaatgacacaactaaaccatttgaaggcgttatggataacgtcgaacgtcgt
tatcgtcgtcccatgtcaaaatttatgcgggatataatgcgaaaatatatgactgagtta
acctgttcaacctgtcatggcaaacgtttaaatgaaaaagctttagcagttaaagttatg
ggtaaggacattgcagaagcttcggatttatctattgataaagctcttaaattctttaag
agtgttaaattagataagcaaggcacgatgattgctaaaccaattttgaaagaagtttgt
gatcgcttaacgttcttaaataatgttgggttagattatctgacattgtcacgttctgct
aatactttatctggtggtgaagcccagcgaattcgtttagctacacaaattggttcgaat
ttgtctggagttatgtatgttttggatgaaccctcaattggattgcaccaacgagataat
gatcgtttgattgcttcacttaagaaaatgcgcgatttgggtaactcattaattgttgtt
gaacacgatgaggagacaatgcgtcaagccgattatattgtcgacatgggtccaggtgct
ggtgcttatggtggtaaagtgatggccgttggcacacctaaagaaatcgaaaaaaatcct
aagtcgttgactggtcaatacttgtctggtaaaaaatttgtgccggttccgttaaagcga
cgtaagggtaacggtaaaaaaattactattactggtgctgctgaaaataatttaaagaat
attaaagtggattttccactaggcaaatttatcgttgtaactggtgtatctggttctggt
aaatctaccttagtcaatatgattttaaaacgtgcattggcacaaaaattaaataataat
tcgattaaaccaggaaagtataagagtatccgtggttataataatattgaaaagataatt
gatattgatcagagtccaattggtagaacgccgcgcagtaatccagccacatatactagt
gtatttgatgatattcgtactttgtttgcacaaaccaacgaagcaaaattacgtgggtat
accaaagcccgtttttctttcaatgtgaaaggtggacggtgtgaagcttgtcatggtgac
ggaattattaaaattgagatgaacttcttacctgatgtttacgttccttgtaaagtttgt
catggtacgcgttataattctgaaactctagaagttacttaccgcaagaaaaatattgcc
caagttttagatatgacaattagcgaggcatgtaaattctttaagaatattccaaagatt
gcccgtaaattgcaaactattgttgatgtaggattaggctacgttaaactcggtcaatct
gctaccactctatctggtggtgaagctcaaagaatgaaacttgctgcagaattgcagaaa
ttgtctactggtaaaaatttctatattcttgatgaacctactactggacttcatacggat
gatatcaaacgcttacttgaagttttacagcgtttggttgatgaaggtaatactgttttg
attattgagcataaccttgatattattaaaaatgcagactggctaattgatttaggtcca
gaaggtggagatggtggtggaacagttgttgccactggtacacctgaacatgtagcccaa
gtaaaagaaagttacaccgggcagtatttgaaaccagttttggagcgtgataccaggtta
accaaggaagcacagaaacaaaagtctaaggccaaatag
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