KEGG   Lactobacillus acetotolerans: LBAT_1149
Entry
LBAT_1149         CDS       T03976                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lae  Lactobacillus acetotolerans
Pathway
lae03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LBAT_1149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lae03400]
    LBAT_1149
DNA repair and recombination proteins [BR:lae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LBAT_1149
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LBAT_1149
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND3 RsgA_GTPase AAA_29 nSTAND1 AAA_22 AAA_23 AAA_21 AAA_33 DnaJ_CXXCXGXG AAA_18 APS_kinase AAA_15 AAA_14 ATPase_2 SLFN-g3_helicase nSTAND6 AAA_24 NACHT Viral_helicase1 cobW RNA_helicase Mtrc-MtrF_II-IV_dom NTPase_1 T2SSE DUF1924 MMR_HSR1 PRK Septin DUF87
Other DBs
NCBI-ProteinID: BAQ57538
UniProt: A0A0D6A3Z3
LinkDB
Position
complement(1180040..1182898)
AA seq 952 aa
MANDKIVIRGAREHNLKDINLTIPKDKMVVITGLSGSGKSSLAFDTLYAEGRRRYVQSLS
SYARQFLGQMDKPDVDSIEGLNPAISIDQKTTSHNPRSTVGTVTEINDYLRLLWARVGHP
ICPNDGTLIERQSVDQMVDRIMKLPERTKIQLLAPVVRSKRGAHKEVFKRVQRAGYVRVI
VDGKMHEIGEKFSLEKNKRHTIDIVVDRLIVKKSIRSRLFDSVEAALRLSDGYMNVDVIG
GQTLNFSEYYACPKCGFTVGEMEPRLFSFNAPFGACPDCDGLGVKLSVDEDLVIPDKSKT
LAEGAVALWKNSKYYGGMLKQACAALKIPMDKPYKKLTKRQRNIILHGSDKVIKFNVTGD
FGVNDTTKPFEGVMDNVERRYRRPMSKFMRDIMRKYMTELTCSTCHGKRLNEKALAVKVM
GKDIAEASDLSIDKALKFFKSVKLDKQGTMIAKPILKEVCDRLTFLNNVGLDYLTLSRSA
NTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIASLKKMRDLGNSLIVV
EHDEETMRQADYIVDMGPGAGAYGGKVMAVGTPKEIEKNPKSLTGQYLSGKKFVPVPLKR
RKGNGKKITITGAAENNLKNIKVDFPLGKFIVVTGVSGSGKSTLVNMILKRALAQKLNNN
SIKPGKYKSIRGYNNIEKIIDIDQSPIGRTPRSNPATYTSVFDDIRTLFAQTNEAKLRGY
TKARFSFNVKGGRCEACHGDGIIKIEMNFLPDVYVPCKVCHGTRYNSETLEVTYRKKNIA
QVLDMTISEACKFFKNIPKIARKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAAELQK
LSTGKNFYILDEPTTGLHTDDIKRLLEVLQRLVDEGNTVLIIEHNLDIIKNADWLIDLGP
EGGDGGGTVVATGTPEHVAQVKESYTGQYLKPVLERDTRLTKEAQKQKSKAK
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggcaaacgataaaattgtgattcgtggtgcacgagagcataacttaaaagatattaat
ttaactattccaaaagataaaatggttgttataactggtttgtctggttctggcaaaagt
tctctagcttttgataccctttatgctgaaggacgcagacgttacgttcaatcattgtct
tcttatgctagacaatttttggggcaaatggataagccagatgttgattcaatcgaaggc
ttaaatccagctatctcaattgaccaaaagacaacgtcacataacccacgatcaactgtt
ggaactgttacagaaattaatgattatttacgtttactttgggctagagtaggtcaccct
atctgtccaaatgatggcaccttaattgaacgtcagtcggtcgatcaaatggttgatcgg
atcatgaaattacctgaaagaactaagattcaacttttagcaccagttgttcgatcgaaa
cgtggtgcacacaaagaagtgttcaaacgagttcaacgggcaggttatgtcagggtaatc
gttgacggtaaaatgcatgaaattggtgagaaatttagtctagagaaaaataagcgtcat
accattgatattgttgttgataggttgattgtcaaaaaaagtatccgttcacgtcttttt
gattccgttgaagcagcattacgtctgtccgatgggtatatgaacgttgacgttattggt
ggccaaacacttaatttctctgagtactatgcttgtcctaaatgtgggtttactgttggc
gagatggaaccaaggctgttttcatttaatgctccttttggtgcctgtccggattgtgat
ggcttaggtgttaagctttctgtcgatgaggatttggttattcctgataaaagtaagact
ttggcagaaggtgctgtagcactttggaagaattcgaagtactacggtggcatgcttaag
caggcctgtgccgcacttaaaattccaatggataagccatataagaaacttactaagcga
caaagaaatattattttacatgggtcagataaagtcattaaatttaatgttactggtgac
tttggtgtaaatgacacaactaaaccatttgaaggcgttatggataacgtcgaacgtcgt
tatcgtcgtcccatgtcaaaatttatgcgggatataatgcgaaaatatatgactgagtta
acctgttcaacctgtcatggcaaacgtttaaatgaaaaagctttagcagttaaagttatg
ggtaaggacattgcagaagcttcggatttatctattgataaagctcttaaattctttaag
agtgttaaattagataagcaaggcacgatgattgctaaaccaattttgaaagaagtttgt
gatcgcttaacgttcttaaataatgttgggttagattatctgacattgtcacgttctgct
aatactttatctggtggtgaagcccagcgaattcgtttagctacacaaattggttcgaat
ttgtctggagttatgtatgttttggatgaaccctcaattggattgcaccaacgagataat
gatcgtttgattgcttcacttaagaaaatgcgcgatttgggtaactcattaattgttgtt
gaacacgatgaggagacaatgcgtcaagccgattatattgtcgacatgggtccaggtgct
ggtgcttatggtggtaaagtgatggccgttggcacacctaaagaaatcgaaaaaaatcct
aagtcgttgactggtcaatacttgtctggtaaaaaatttgtgccggttccgttaaagcga
cgtaagggtaacggtaaaaaaattactattactggtgctgctgaaaataatttaaagaat
attaaagtggattttccactaggcaaatttatcgttgtaactggtgtatctggttctggt
aaatctaccttagtcaatatgattttaaaacgtgcattggcacaaaaattaaataataat
tcgattaaaccaggaaagtataagagtatccgtggttataataatattgaaaagataatt
gatattgatcagagtccaattggtagaacgccgcgcagtaatccagccacatatactagt
gtatttgatgatattcgtactttgtttgcacaaaccaacgaagcaaaattacgtgggtat
accaaagcccgtttttctttcaatgtgaaaggtggacggtgtgaagcttgtcatggtgac
ggaattattaaaattgagatgaacttcttacctgatgtttacgttccttgtaaagtttgt
catggtacgcgttataattctgaaactctagaagttacttaccgcaagaaaaatattgcc
caagttttagatatgacaattagcgaggcatgtaaattctttaagaatattccaaagatt
gcccgtaaattgcaaactattgttgatgtaggattaggctacgttaaactcggtcaatct
gctaccactctatctggtggtgaagctcaaagaatgaaacttgctgcagaattgcagaaa
ttgtctactggtaaaaatttctatattcttgatgaacctactactggacttcatacggat
gatatcaaacgcttacttgaagttttacagcgtttggttgatgaaggtaatactgttttg
attattgagcataaccttgatattattaaaaatgcagactggctaattgatttaggtcca
gaaggtggagatggtggtggaacagttgttgccactggtacacctgaacatgtagcccaa
gtaaaagaaagttacaccgggcagtatttgaaaccagttttggagcgtgataccaggtta
accaaggaagcacagaaacaaaagtctaaggccaaatag

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