Luteibacter aegosomatis: L2Y94_04230
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Entry
L2Y94_04230 CDS
T09054
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
laeg
Luteibacter aegosomatis
Pathway
laeg02020
Two-component system
laeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
laeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L2Y94_04230
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L2Y94_04230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laeg03021
]
L2Y94_04230
Transcription machinery [BR:
laeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2Y94_04230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
HTH_Tnp_Tc3_2
HTH_IclR
Relaxase_C
NUDIX
HTH_38
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UPG86571
LinkDB
All DBs
Position
complement(957618..959093)
Genome browser
AA seq
491 aa
AA seq
DB search
MKPGLQFRLNQQLTLTPQLQQAIRLLQLSQLELEAELRQIAEGNPLLEFAEDAESEAESE
TEAFDAPEFPLRDEAPAKASKEEDNATAPAEDLTPDWDDDRFQGEAGDYGGASSRGAGGD
DDGLEPQNAAPESLQQHLEWQLNLSQFSPRDHAIAMAIIHALDEDGYLRDGVEAVASALP
AELGASGEAIESVRQRVQRFDPTGIASLDLRDCLACQLSQFSSDTPHRALALRVVNDELE
LLARNDIARIARKLKAAEDEVAAAAALIRTLDPRPGAALDATPVEYVAPDVYARRENGRW
KVSLNPDAQPRLGLNQHYCSLIARARGDDATWMKGQLQEARWLLKSLQSRAETLTKVAEA
IVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHFFSSG
VATEDGGSASATAIQAMLRKLIGAEDARRPLSDQALAEELHRRGIQVARRTVAKYREALR
IPSSSERVRAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggacttcagtttcgcctcaaccagcagctgacgctgacgccgcaactccag
caggccatccgcctgctccagttgtcgcagctcgagctcgaagcggaactccgccagatc
gcggaaggcaatccgctgctcgagttcgccgaagatgccgagtccgaggccgaatccgag
accgaagccttcgacgcgccggaattcccgctgcgcgatgaagcaccggcgaaggcctcg
aaagaagaagacaacgccaccgccccggccgaagatctcacccccgactgggacgacgac
cgcttccagggcgaggcgggcgactacggcggggcatcctcgcgcggcgccggcggcgac
gacgacggtctcgaaccccagaacgccgcgccggaaagcctccagcagcacctggagtgg
cagctcaatctctcgcagttctcgccgcgcgatcacgccatcgccatggcgatcatccac
gcgctcgacgaagacggttacctgcgcgatggcgtcgaagccgtggcctcggccctgccc
gccgaactgggcgcgagcggtgaagccatcgagtccgtacgccagcgcgtccagcgcttc
gaccccaccgggatcgccagcctcgacctgcgcgattgccttgcctgccagctttcgcag
ttttcgtccgatacgccgcaccgcgcgctggccttgcgcgtggtcaacgacgaactcgaa
ctgctcgcgcgcaacgacatcgcccgcatcgcgcgcaagctgaaagcggccgaggacgag
gtcgccgccgccgccgcgctcatccgcaccctcgacccccgcccgggcgccgcgctcgac
gccacgccggtggagtacgtcgcgcccgacgtctacgcccggcgggagaacggccgctgg
aaggtgagcctcaatcccgacgcccagccccgcctgggcctcaaccagcactattgcagc
ctcatcgcccgcgcgcgcggcgacgatgccacctggatgaaaggccagctccaggaagcc
cgctggctgctgaagagcctgcaatcgcgcgcggaaacgctcaccaaggtcgccgaggcc
atcgtccgccggcagagcgcgttcctcgattacggccccgaggccatgcatccgctggtg
ttgcgcgaagtggccgaggaggtgggcatgcacgagtccacgatctcccgcgtgaccacg
cgcaagtacatgcataccccgcgaggcacgttcgagctcaagcacttcttctccagcggc
gtcgccacggaagacggcggcagcgcgtcggccacggccatccaggccatgctgcgcaag
ctcatcggcgccgaggacgcgcgccgcccgctgtccgaccaggccctcgcggaggaactc
catcgacgcggtattcaggtcgcccgccgtacggtggccaagtatcgtgaggcactgcgc
atccccagttcgagcgagcgcgtacgcgccggttga
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