Luteibacter aegosomatis: L2Y94_06175
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Entry
L2Y94_06175 CDS
T09054
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
laeg
Luteibacter aegosomatis
Brite
KEGG Orthology (KO) [BR:
laeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laeg03019
]
L2Y94_06175 (hrpA)
Enzymes [BR:
laeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
L2Y94_06175 (hrpA)
Messenger RNA biogenesis [BR:
laeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L2Y94_06175 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
DEAD
AAA_22
WHD_HA2
HA2_C
nSTAND3
SRP54
AAA_19
NACHT
nSTAND_NTPase5
AAA_25
T2SSE
AAA_30
AAA_23
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UPG86938
LinkDB
All DBs
Position
1338334..1342359
Genome browser
AA seq
1341 aa
AA seq
DB search
MSTSTSPSRPIPSDSRLKELRDALSRVASRDYGRLLGRWRGLSRKPDAARIDALGADISA
SMARRAARAASKPAISVDAALPIAARADDIVKLIRDHQVVVIAGETGSGKTTQLPKLCLA
AGRGEAGLIGCTQPRRLAARSVATRVAEELGTPVGDKVGFQVRFTEKVSDQALVKFMTDG
ILLAETQSDPWLSAYDTIIIDEAHERSLNIDFLLGYLKRLAQRRPDLKIIVTSATIDTER
FAEHFGGAPVVAVEGRTYPVEVRYRPPGERGEGNLAQQIADTMDEITREDPRGDVLVFLP
GEREIRDTHLLLSRKTYRETEVLALYARLSANEQDRVFRPGPKRRIVLATNVAETSLTVP
RIRYVIDPGTARVKRYSQRGQLERLHVEPISQAAANQRKGRCGRIGPGICYRLFDEADFA
LRPEYTDPELLRSSLANVILRMLALDLGEVDDFPFLEAPDPRVVADGYRRLAEIGAIDED
RRLTEVGRTVARLPIDVQLARMLVEARRLGSLADLTTIVAFLSIQDPRERPPEARGQADA
AHAQFADPKSDFVGVVNLWKAYLAAAEELTSSKLRDWCSRHFLSFMRMREWRELHRQLVL
VTRDLGWETKGGESASVGAAPVRDGRRSSTRIADRGRSHPAPGDSARTRPTSAVPATVPD
GDALFEAIHRSLLAGLPTQIGHKDEKGVYRGTRERRFQVFPGSALAKAPPAWIFAAQILD
IGGRVWAMMCARVDPAWVESQAAHLVRSTARDPHWSRKRGTVVAYEQVTLFGLVLVERRP
VTFQRQDPKLAHEIFVREALVRADLDSRADFVRANARVLEQAHDIEAKQRRAGLLRSDEA
LAEFFDGKLPESIADTRALDAWYRKAAPAEQAALRWTLADVMDTGAGLDPKAFPASLDIG
QHRYRLEYRFVPGDPADGVTIHVPLAFLNALPAARGEWLVGGLLVDKVAELIRGLPKALR
RNFVPAPDFARAFAEAETPRDEPLAKALAAFLKRTTGVDVDASAFADAELPPHLLMRFRV
HDENGRTVAEDRDLAAIRARWEGKAREAFSRKTDIELTREDIATWDFESIPKEVRSEGGL
KAYPALVDLGEAVALRVFERADEAAEAHVGGVERLLRQALGSEIKRARRQLPINNALSLK
YAPLGSIDGLRDDLVEGGFDDLLAKHRLDARTQGEFETLRVDFGRELFGAAMERQKLAEP
IIEAQAELKPWMDPPLMGFAKASYDDLREQLAALLQPGFLRELPVSRLAHFPRYLKAMRL
RGERLRQDPARDQSRMLQVLPYWRALLNGGGTAWDAVAWSELRWLLEEWRVSLFAQELKT
AEPVSAKRLARALEMAEAATR
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctcgacaagtccctcccgccccattccgtccgattcgcgcctgaaagagctg
cgcgacgccctgtcccgggtggccagccgcgattacgggcgcctgctgggccgctggcgc
ggactctcccgcaagcccgacgcggcccggatcgacgccctcggcgcggatatctccgcc
tcgatggcacgccgcgcggcgcgggccgcgtccaagcccgccatcagcgtcgacgccgcg
ctgcccatcgccgcccgggccgacgacatcgtcaagctcatccgcgaccaccaggtggtg
gtgatcgccggcgagaccggctcgggcaagaccacccagttgcccaagctgtgcctggcc
gccggccgcggcgaggccgggctcatcggctgcacccagccgcgccggctggctgcccgc
tcggtggcgacccgcgtcgccgaggagctgggcacgccggtgggcgacaaggtcggcttc
caggtgcgcttcaccgagaaggtatccgaccaggcgctggtcaagttcatgaccgacggc
atcctgctggccgagacgcagtccgatccctggctgtcggcctacgacacgatcatcatc
gacgaggcccacgaacgcagcctcaacatcgatttcctgctgggttacctcaagcgcctg
gcccagcgccggcccgacctcaagatcatcgtcacgtcggccaccatcgacaccgaacgc
ttcgccgagcatttcggcggcgcgcccgtggtggcggtggaaggacgcacctatccggtg
gaagtgcgctaccggcctccgggcgagcgcggcgagggcaacctcgcccagcagatcgcc
gacaccatggacgagatcacccgcgaggaccctcgcggcgacgtgctggtgttcctgccc
ggcgagcgcgagatccgcgacacgcacctgctgctttcgcgaaagacctaccgtgagacc
gaggtgctggcgctctacgcgcgcctgtccgccaacgagcaggatcgcgtattccgtccc
ggcccgaaacgccggatcgtgctcgccaccaacgtggccgaaacctcgctcacggtgccg
cgcatccgctacgtgatcgacccgggcacggcgcgcgtgaaacgctacagccagcgggga
cagctcgagcgcctgcacgtcgagcccatctcgcaggcggccgccaaccagcgcaaaggc
cgttgcggacgcatcgggccgggtatttgctatcgcctcttcgacgaggcggacttcgcg
ctgcgcccggagtacaccgatccggaactgctgcgctcctcgctcgccaacgtcatcctg
cgcatgctcgcgctcgacctcggcgaagtggacgacttcccgttcctcgaggcacccgat
ccgcgcgtggtggcggacggttaccgccgcctcgccgagatcggcgccatcgacgaggac
cgccgtctcaccgaggtgggccgcacggtggcgcgcctgcccatcgacgtgcagctggcg
cgcatgctggtggaagctcgccgcctgggcagcctcgccgacctcacgaccatcgtggcc
ttcctcagcatccaggacccgcgcgagcggccgccggaggcacgcgggcaggccgatgcg
gcgcatgcgcagttcgccgaccccaagtcggacttcgtcggcgtggtcaatctgtggaag
gcctacctggccgccgcggaagaactgacctcgtcgaagctgcgcgactggtgctcacgg
catttcctgagcttcatgcgcatgcgcgagtggcgggagctccaccggcagctggtgctg
gtgacgcgggacctgggttgggagaccaaaggcggcgaatccgcttcggtgggagcggcc
cctgtccgcgatgggcggcgtagctccacccgaatcgcggacaggggccgctcccaccca
gccccgggcgattcggcaagaacccggcccacctcggccgttcccgccaccgtgcccgac
ggcgacgcgctcttcgaagccatccatcgcagcctgctcgccggcctgccgacacagatc
ggccacaaggacgagaagggcgtctatcgcggtacccgcgagcggcgcttccaggtgttc
cccggctccgcgctggcgaaagcgccgccggcctggatcttcgccgcgcagatcctcgac
atcggtggccgcgtgtgggcgatgatgtgcgcgcgcgtcgatcccgcgtgggtcgaatcg
caggcggcgcacctggtgcgctccaccgcgcgcgatccgcactggtcgcgcaagcgcggc
accgtcgtcgcctacgagcaggtcaccctgttcggcctggtgctggtggaacgccggcct
gtgaccttccagcggcaggatccgaagctcgcccacgagatcttcgtgcgcgaagcgctg
gtgcgcgccgatctcgacagccgcgctgatttcgtgcgcgccaacgcgcgcgtgctcgaa
caggcccacgacatcgaggccaagcagcgccgcgccggcctgcttcgctcggacgaggcc
ctggccgaattcttcgacggcaagctgcccgaatccatcgccgacacgcgtgcgctggac
gcctggtaccgcaaggcggcaccggccgagcaggcggcgctgcgctggacgctggccgac
gtcatggacaccggcgctggcctggatccgaaggctttccccgcctcgctggacatcgga
cagcaccgttaccggctcgaataccgtttcgtgcccggcgatccggccgacggcgtcacc
atccacgtgccgctggccttcctcaacgccttgcccgcggcgcgcggcgaatggctggtc
ggcggcctgctggtggacaaggtggccgagctgatccgtggcctgcccaaggccctgcgc
cgcaacttcgtacccgcaccggacttcgcccgtgcctttgccgaagccgaaacgccgcgt
gacgagccgctggcgaaagccttggcggcgttcctgaagcgcaccacgggcgtcgacgtc
gacgcgtccgcgttcgcggatgcggaattgcccccgcacctgctcatgcgtttccgcgtg
cacgacgagaacggccgcacggtggccgaagaccgcgacctcgccgccatccgtgcgcgc
tgggaaggcaaggcgcgcgaggccttctcgcgcaagaccgacatcgagctcacgcgcgaa
gacatcgccacgtgggacttcgagtccatcccgaaggaagtacgttccgagggcggcctc
aaggcctatccggcactggtcgacctcggcgaggccgtggccttgcgcgtgttcgaacgc
gccgacgaggccgccgaagcccatgtgggcggcgtggagcgcctgcttcgccaggccctg
ggctccgagatcaagcgcgcgcgtcgacagttgccgatcaacaacgccctttcgctgaaa
tacgctccgctgggcagcatcgacggccttcgcgacgacctcgtcgaaggcggcttcgac
gacctgctcgcgaagcaccgcctcgatgcccgcacgcagggcgaattcgaaaccctgcgc
gtcgatttcggccgcgagctgttcggcgcggcgatggagcggcagaagctggccgaaccg
atcatcgaggcacaggccgaattgaaaccctggatggacccgccgctgatgggtttcgcc
aaggcgagttacgacgaccttcgcgagcagctggccgcgctgctccagcccggcttcctt
cgcgagctgcccgtttcccgcctggcccatttcccgcgctatctcaaggcgatgcgcctg
cgcggcgaacgcttgcgccaggatccggcgcgcgaccagtcgcgcatgctccaggtgctg
ccctactggcgcgcgctgctcaatggcggtggcacggcatgggatgccgtcgcatggagc
gaactgcgctggctgctggaagaatggcgtgtatcgttgttcgcgcaggaactgaagacc
gccgagccggtatcggccaagcggctggcgcgcgcactggagatggccgaggcggcaacc
cgatga
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integrated database retrieval system
